Pairwise Alignments

Query, 538 a.a., Nitrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 513 a.a., NifK nitrogenase molybdenum-iron protein beta chain from Sinorhizobium meliloti 1021

 Score =  217 bits (552), Expect = 1e-60
 Identities = 137/461 (29%), Positives = 217/461 (47%), Gaps = 34/461 (7%)

Query: 79  NACKLCTPLGAMLAFRGVEGAVPFLHGSQGCATYMRRYVISHYREPMDIASSSLGEKQAV 138
           N  K C PLGA+ A  G E  + F+HGSQGC  Y R ++  H++EP    SSS+ E  AV
Sbjct: 65  NPAKACQPLGAVFAAAGFERTMSFVHGSQGCVAYYRSHLSRHFKEPSSAVSSSMTEDAAV 124

Query: 139 YGGGPNLKKGILNVMKKYDPVLVGVATTCLTETIGDDVGGYLREFRNEFG---DLDLPEI 195
           +GG  N+  G+ N  K YDP ++ V+TTC+ E IGDD+ G++   ++E     D D+P  
Sbjct: 125 FGGLKNMVDGLANTYKLYDPKMIAVSTTCMAEVIGDDLHGFIENAKDEGAVPHDFDVP-- 182

Query: 196 VHVHTPSYNGTHLEGWHAAVRALVDQL--ARDRVEPHGKVALLPGF--VSPADLRHLRDL 251
              HTP++ G+H++G+ + V+ +++       R    G + ++PGF      + R L+ L
Sbjct: 183 -FAHTPAFVGSHVDGYDSMVKGVLENFWKGEQRTVNPGSINIIPGFDGFCVGNNRELKRL 241

Query: 252 ITDFGSDAVILPDLSDPLDGPALEDYTPLPEGGTPLADIRALSGAAGVIECGRSLAMTPT 311
           +   G     + D SD  D P+  ++  + +GGT + D+RA   A   +   +       
Sbjct: 242 LNLMGVSYTFIQDASDQFDTPSDGEFR-MYDGGTKIEDVRAALNAEATVSLQQYNTRRTL 300

Query: 312 GSSGSSGSSGSSGSAGPATAGRVLDERFGLPLHAVGLPIGLRETDALVSALEAITGKPLP 371
               ++G S  S                         P+G++ TD  +  +  I+G+ +P
Sbjct: 301 EYCKAAGQSTVS----------------------FHYPLGVKATDEFLVKVSEISGREIP 338

Query: 372 HKHELERGRFVDALVDGHKYVSGKRAVVYGEADLVIGLVSLLTEIGVH-TVLAATGMRGA 430
               LERGR VDA+ D   ++ GK+  +YG+ D V  +   + E G   T   AT    A
Sbjct: 339 EAIRLERGRLVDAMADSQSWLHGKKYAIYGDPDFVYAVARFIMETGGEPTHCLATNGTPA 398

Query: 431 HLAESIAAVTEGMLPAMPTVIEGADFEEIADTAEGLSPDLLVGNSKGYRYARQWNIPLVR 490
             AE    +    L     V    D   +         DLL+GNS G    R    PL+R
Sbjct: 399 WEAEMKMLLASSPLGNDAQVWASKDLWAMRSLLFTEPVDLLIGNSYGKYLERDTGTPLIR 458

Query: 491 AGFPIHDRFGGHRLLHVGYAGAQALMDRIVNAVIEKTQSDS 531
             FPI DR   HR   +GY G   ++  I++ + ++   ++
Sbjct: 459 LMFPIFDRHHHHRFPLMGYQGGLRVLTTILDKIFDRLDRET 499