Pairwise Alignments

Query, 538 a.a., Nitrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 519 a.a., nitrogenase iron-iron protein, alpha chain (NCBI) from Rhodospirillum rubrum S1H

 Score = 48.9 bits (115), Expect = 5e-10
 Identities = 94/433 (21%), Positives = 156/433 (36%), Gaps = 68/433 (15%)

Query: 104 HGSQGCATY----MRRYVISHYREPMDIA-SSSLGEKQAVYGGGPNLKKGILNVMKKYDP 158
           HG  GC TY     +RY+  +    +    ++ + EK  V+G    LK+ IL   K +  
Sbjct: 70  HGPIGC-TYDTWQTKRYISDNNNFQLKYTYATDVREKHIVFGAEKLLKQNILEAFKAFPD 128

Query: 159 VL-VGVATTCLTETIGDDVGGYLREFRNEFGDLDLPEIVHVHTPSYNGTHLEGWHAAVRA 217
           +  + +  TC T  IGDD+     E  +E  D+D   I   ++P + G    G H  +  
Sbjct: 129 IKRMTIYQTCATALIGDDIDAIASEVMDELPDVD---IFVCNSPGFAGPSQSGGHHKINI 185

Query: 218 LVDQLARDRVEPHGKVALLPGFVSPADLRHLRDLITDFGSDAVILPDLSDPLDGPALEDY 277
                    VEP      +  +V   +++           D  ++ D  + +    L  +
Sbjct: 186 AWVNQKVGTVEPEITSDYVINYVGEYNIQ----------GDQEVMQDYFNRMGIQILSTF 235

Query: 278 TPLPEGGTPLADIRALSGA-AGVIECGRSLAMTPTGSSGSSGSSGSSGSAGPATAGRVLD 336
           T    G      +RA+  A   V+EC RS            G              R+  
Sbjct: 236 T----GNGSYDGLRAMHRAHLNVLECARSAEYICNELRVRYG------------IPRLDI 279

Query: 337 ERFGL-----PLHAVGLPIGLRETDALVSALEAITGKP-LPHKHELERGRFVDALVDGHK 390
           + FG       L  +GL  G+ +    +   E    KP L    E  RG+ V     G K
Sbjct: 280 DGFGFEPLSDSLRKIGLFFGIEDRAQAIIDEETAKWKPQLDWYKERLRGKKVCLWPGGSK 339

Query: 391 YVSGKRAVVYGEADLVIGLVSLLTEIGVHTVLAATGMRGAHLAESIAAVTEGMLPAMPTV 450
                  +   + ++ + +VSL T+ G              + + IA   EG L      
Sbjct: 340 LWHWAHVI---QEEMGLNVVSLYTKFG----------HQGDMEKGIARCGEGAL-----A 381

Query: 451 IEGADFEEIADTAEGLSPDLLVGNSKGYRYARQWNIPLVRAGFPIHDRFGGHRLLHVGYA 510
           I+  +  E  +  E L PD+++   +    A++  +P + A          H   + GY 
Sbjct: 382 IDDPNELEGLEALEMLKPDIILTGKRPGEVAKKVRVPYLNA-------HAYHNGPYKGYE 434

Query: 511 GAQALMDRIVNAV 523
           G       I NA+
Sbjct: 435 GWVRFARDIYNAI 447