Pairwise Alignments

Query, 538 a.a., Nitrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 462 a.a., Nitrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score =  220 bits (561), Expect = 8e-62
 Identities = 147/465 (31%), Positives = 239/465 (51%), Gaps = 36/465 (7%)

Query: 70  KRPDFVSTTNACKLCTPLGAMLAFRGVEGAVPFLHGSQGCATYMRRYVISHYREPMDIAS 129
           ++ + + T N    C P GA  A  G++  +  +HG QGC  ++R  +  H +E  +IAS
Sbjct: 6   RKKERIGTINPIFTCQPAGAQYASIGIKDCIGIVHGGQGCVMFVRLLISQHLKESFEIAS 65

Query: 130 SSLGEKQAVYGGGPNLKKGILNVMKKY-DPVLVGVATTCLTETIGDDVGGYLRE-----F 183
           SS+ E  AV+G    +++ +  ++ +Y D  ++ + TTC TE IGDDV G +R+      
Sbjct: 66  SSVHEDGAVFGALDRVEQAVDVLLMRYPDVKVIPIITTCSTEVIGDDVDGVVRKLEEGLL 125

Query: 184 RNEFGDLDLPEIVHVHTPSYNGTHLEGWHAAVRALVDQLARDRVEPHGKVALLPGFVSPA 243
           + +F D ++  ++ +HTPS+ G+ + G+  AVR  V   A+ + +P  K+ L+ G+V+P 
Sbjct: 126 KEKFPDREV-HLIPIHTPSFVGSMVTGYDVAVRDFVKAFAK-KGKPSLKINLITGWVNPG 183

Query: 244 DLRHLRDLITDFGSDAVILPDLSDPLDGPALEDYTPLPEGGTPLADIRALSGAAGVIECG 303
           D++ L+ L+ +   +A +L ++ +  D P + D + +  G T + D+   + A G I   
Sbjct: 184 DVKELKHLLAEMRVEANVLFEI-ESFDSPLMPDKSAVSHGSTTIDDLIDTANAQGTIALN 242

Query: 304 RSLAMTPTGSSGSSGSSGSSGSAGPATAGRVLDERFGLPLHAVGLPIGLRETDALVSALE 363
           R                        A A   L + F +P      PIG+R TD  +  L+
Sbjct: 243 RYEG---------------------AKAAEFLQKGFDVPAVIGPTPIGIRNTDTFLQNLK 281

Query: 364 AITGKPLPHKHELERGRFVDALVD-GHKYVSGKRAVVYGEADLVIGLVSLLTEIGVHTVL 422
            +TGK +P     ERG  +DAL D  H +++ K+  +YG  DLVIGL     ++ +  +L
Sbjct: 282 IMTGKAIPPSLVRERGIAIDALTDLVHMFLADKKVAIYGNPDLVIGLAEFCLDLEMKPML 341

Query: 423 AATG--MRGAHLAESIAAVTEGMLPAMPTVIEGADFEEIADTA--EGLSPDLLVGNSKGY 478
              G    G      I A+ E +   M  +I  AD  E+ D    +GL  DL++G+SKG 
Sbjct: 342 LLLGDENAGYETDPRIKALQERVDHDM-EIITNADLWELEDRVKNKGLELDLILGHSKGR 400

Query: 479 RYARQWNIPLVRAGFPIHDRFGGHRLLHVGYAGAQALMDRIVNAV 523
             A   NIP+VR GFP +DR G +R   VGYAGA  L + + N +
Sbjct: 401 FTAIDNNIPMVRVGFPTYDRAGLYRHPVVGYAGATWLAEAMANTL 445