Pairwise Alignments

Query, 538 a.a., Nitrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 510 a.a., Nitrogenase molybdenum-iron protein beta chain (NCBI) from Rhodospirillum rubrum S1H

 Score =  202 bits (513), Expect = 3e-56
 Identities = 139/461 (30%), Positives = 214/461 (46%), Gaps = 34/461 (7%)

Query: 79  NACKLCTPLGAMLAFRGVEGAVPFLHGSQGCATYMRRYVISHYREPMDIASSSLGEKQAV 138
           N  K C PLGA+ A  G +G + ++HGSQGCA Y R ++  H++E   + S S+ E  AV
Sbjct: 65  NPNKACQPLGALFAAAGFDGTLGYVHGSQGCAAYFRSHLSRHFKEASSVVSDSMTEDAAV 124

Query: 139 YGGGPNLKKGILNVMKKYDPVLVGVATTCLTETIGDDVGGYLREFR-NEFGDLDLPEIVH 197
           +GG  N+  G+ N    Y P ++ V T+C+ E IGDD+  ++   +  E    D P +  
Sbjct: 125 FGGLNNMVDGLANAYALYKPKMIAVCTSCMAEVIGDDISSFIGNAKTKESIPADFP-VPF 183

Query: 198 VHTPSYNGTHLEGWHAAVRALV----DQLARDRVEPHGKVALLPGF--VSPADLRHLRDL 251
            HTPS+ G+H+ G+   ++ ++    D   RD      K+ ++PGF   S  ++R L+ +
Sbjct: 184 AHTPSFVGSHIVGYDNMMKGILTTFWDGKVRDAAT--DKINIIPGFDGYSVGNIRELKRI 241

Query: 252 ITDFGSDAVILPDLSDPLDGPALEDYTPLPEGGTPLADIRALSGAAGVIECGRSLAMTPT 311
           +   G +  +L D SD  D P   ++  + +GGT   D  A   A   +           
Sbjct: 242 LGMIGVEYTVLSDTSDVYDTPTDGEFR-MYDGGTTQDDTIAALQAKATLSL--------- 291

Query: 312 GSSGSSGSSGSSGSAGPATAGRVLDERFGLPLHAVGLPIGLRETDALVSALEAITGKPLP 371
                      S    PAT   + +   G    A   P+G+  TD  +  L A+TGK +P
Sbjct: 292 -----------SEYCTPATLKFIAET--GQETAAFNYPMGVGATDDFLVKLVALTGKDIP 338

Query: 372 HKHELERGRFVDALVDGHKYVSGKRAVVYGEADLVIGLVSLLTEIGVHTV-LAATGMRGA 430
                ERGR VDAL D   ++ GK+  VYG+ D  + +V  L E+GV  V + AT     
Sbjct: 339 EALTKERGRLVDALADSMTWLHGKKMAVYGDPDFTLSMVRFLLEMGVEPVHVLATNGTKK 398

Query: 431 HLAESIAAVTEGMLPAMPTVIEGADFEEIADTAEGLSPDLLVGNSKGYRYARQWNIPLVR 490
              +  A +          V +G D   +         D L+GNS G        IPL+R
Sbjct: 399 WEKQVKALLATSPFGKDAQVWQGKDLWHLRSLLATEPADFLIGNSYGKYLELDLGIPLIR 458

Query: 491 AGFPIHDRFGGHRLLHVGYAGAQALMDRIVNAVIEKTQSDS 531
             FPI DR   HR   + Y G+  ++  I++ V +    +S
Sbjct: 459 LTFPIFDRHHHHRFPTMFYDGSLRVLTTILDKVFDTLDRES 499