Pairwise Alignments

Query, 538 a.a., Nitrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 522 a.a., nitrogenase iron-iron protein, alpha chain from Rhodopseudomonas palustris CGA009

 Score = 45.1 bits (105), Expect = 7e-09
 Identities = 87/401 (21%), Positives = 149/401 (37%), Gaps = 61/401 (15%)

Query: 104 HGSQGCATY----MRRYVISHYREPMDIA-SSSLGEKQAVYGGGPNLKKGILNVMKKYDP 158
           HG  GC TY     +RY+  +    +    ++ + EK  V+G    LK+ I+   K    
Sbjct: 70  HGPVGC-TYDTWQTKRYISDNNNFQLKYTFATDVREKHIVFGAEGLLKQNIIEAFKACPD 128

Query: 159 VL-VGVATTCLTETIGDDVGGYLREFRNEFGDLDLPEIVHVHTPSYNGTHLEGWHAAVRA 217
           +  + +  TC T  IGDD+     E   E  D+D   I   ++P + G    G H  +  
Sbjct: 129 IKRMTIYQTCATALIGDDINAVAAEVMEEMPDVD---IFTCNSPGFGGPSQSGGHHKINI 185

Query: 218 LVDQLARDRVEPHGKVALLPGFVSPADLRHLRDLITDFGSDAVILPDLSDPLDGPALEDY 277
                    VEP      +  +V   +++  ++++ D+ +   I            L  +
Sbjct: 186 AWINDKVGTVEPEITSDYVINYVGEYNIQGDQEVMLDYFTRMGI----------QVLSTF 235

Query: 278 TPLPEGGTPLADIRALSGA-AGVIECGRSLAMTPTGSSGSSGSSGSSGSAGPATAGRVLD 336
           T    G      +RA+  A   V+EC RS            G              R+  
Sbjct: 236 T----GNGTYDGLRAMHRAHLNVLECARSAEYICNELRVRYG------------IPRLDI 279

Query: 337 ERFGL-----PLHAVGLPIGLRETDALVSALEAITGKP-LPHKHELERGRFVDALVDGHK 390
           + FG       L  +G+  G+ +    + A E    KP L    E  +G+ V     G K
Sbjct: 280 DGFGFEPLSQSLRKIGMFFGIEDRAEAIIAEETARWKPELDWYKERLKGKKVCLWPGGSK 339

Query: 391 YVSGKRAVVYGEADLVIGLVSLLTEIGVHTVLAATGMRGAHLAESIAAVTEGMLPAMPTV 450
                 A+   E ++ + +VS+ T+ G H      G+  A   E   A+ +      P  
Sbjct: 340 LWHWAHAI---EEEMGVKVVSVYTKFG-HQGDMEKGI--ARCGEDALAIDD------PNE 387

Query: 451 IEGADFEEIADTAEGLSPDLLVGNSKGYRYARQWNIPLVRA 491
           +EG       +  E L PD++    +    A++  +P + A
Sbjct: 388 LEG------LEALEKLQPDIIFTGKRPGEVAKKVRVPYLNA 422