Pairwise Alignments

Query, 864 a.a., MscS Mechanosensitive ion channel (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 871 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  198 bits (504), Expect = 1e-54
 Identities = 181/669 (27%), Positives = 292/669 (43%), Gaps = 118/669 (17%)

Query: 198 LNEGRKNLTTLRTRLARALDPGQAVNAKLTQALEQIDAQLPTLWRTYYLVASSSLMDLGV 257
           L+ GR+ LT   +R    L P     A    A+   +  +P +    + V   ++  LGV
Sbjct: 266 LSPGRRWLTRRTSRDPSVLHPSGLARATAAAAITLANLLIPAI---AFFVLYQAMSILGV 322

Query: 258 WLSLPANLAA--------------WSDTTEIRLATEFPQ----SARDWGALLLRFAFLVV 299
              LPA+LAA              +   +   LA E P        D  A  L    + +
Sbjct: 323 ---LPADLAAVLRPVFFGLTFASFFYGLSIAVLAPERPSWRLVDVTDAAAEKLIPVIVAM 379

Query: 300 PLFLLGRLALQ---RGCRLPGGWADSCRNVAARSWPWIAVGIALHFASWARGGEVYRAVV 356
            + + G LAL    +    P  +A + + + A +   +A+ IAL F +     E  +   
Sbjct: 380 AVIIAGGLALDAFLKATHAPLSFAVAAQGLGAVALGILAM-IALRFVAREDDDESQQGAS 438

Query: 357 VPAHLLL--LWGELTLVWSLRAAGLAGVPQRSPLSLLFAPAAIGVLLLFLNPPAVLLAPL 414
               LL+   W    L      AG     + + L ++F  A +  L+L L          
Sbjct: 439 SAWRLLIPVTWAVAALTVVAPLAGFVAFGRFAALQIVFTTAVLMSLVLLLR--------- 489

Query: 415 WALCMVAVLAVRARRGRPRVLPLLEKVLLACEPALCIISLLAAVFGWARLAIPF-----F 469
                                       LA E      S+   + G+ R AI F      
Sbjct: 490 ----------------------------LADEAISYGFSVQTRIGGFMRQAIGFKPNTIS 521

Query: 470 LVGLAVAVALQLGAVLVALVTLLAERLPEKGMRALLRGLVLGLGAPAMWVVAAATLL-PW 528
            +G+ +A   +L  +++A++ LLA                        W + +  ++  +
Sbjct: 522 QIGVILAGFARLVVIMIAIMALLAP-----------------------WGIQSEDVVGTF 558

Query: 529 MSAFPGGPYMMRQALELNVNVGSVSFNSLRVLGLVLLFYLTRSAIAVGTSFLDNLPARLP 588
            SAF G              +G  SF+   +LG +++F +   A      +LD       
Sbjct: 559 ASAFFG------------FEIGGFSFSPSAILGAIVVFIIVIVATRGFQRWLDGRLLPQT 606

Query: 589 RVERGVIPPLQTGLTYALWALFGLVVLNALGVSLTSLTVIAGGLSVGLGFGLQTIFNNFF 648
            ++ G+   + TG+ Y   A+ GLV  +  G++L ++ ++A  LSVG+GFGLQ+I NNF 
Sbjct: 607 SLDAGLRTSIHTGVGYVGAAIAGLVAFSYAGLNLQNVAIVASALSVGIGFGLQSIVNNFV 666

Query: 649 SGLILIFGRSLLEGDIIQIGETWGTVRKISIRSTTVETFDNAVIFVPNSEFVSNRLTNWT 708
           SG+IL+  R    GD I++G+  G V+++S+R+T ++TFDN  + VPN++ +S ++ NW 
Sbjct: 667 SGIILLAERPFKVGDRIEVGQNMGIVQRVSVRATQIQTFDNVTVIVPNADLISGQVVNWM 726

Query: 709 RNSMRMRRDIAIGVAYGSDIDKVTELLKQAAEDHPRVMRDPAPNVLFQDFGPSSLDFVLR 768
                 R  I +GV+Y SD ++V  +L + A D+PRV++ P P V F DFG  +L F L 
Sbjct: 727 HGDFSARLKIPVGVSYDSDPEQVRRVLLEIAMDNPRVLKIPEPFVSFTDFGADALQFTLF 786

Query: 769 VWVDDLNHGVSTASDLRRTIDRLFRENAIEISFPQMDVHVR---GIEGM-------PVST 818
             V ++N     ASD+R  I R FRE  IE+ F Q ++H+R    IEG+         +T
Sbjct: 787 CHVGNINADAGAASDMRFEIARRFREEKIEMPFGQREIHLRDLASIEGLVRELFDGRAAT 846

Query: 819 AALASPDPG 827
            A AS  PG
Sbjct: 847 PAPASSQPG 855



 Score = 38.9 bits (89), Expect = 1e-06
 Identities = 105/503 (20%), Positives = 182/503 (36%), Gaps = 97/503 (19%)

Query: 96  KALPDMVKALDSQVAAMQRDYQRLFALYQLSRNHPSEMAAIRRQMAGVQRTLQGRLAPME 155
           +A P+    +D+  A ++R  + L    Q  R     ++ +RRQ+  +     G  A ++
Sbjct: 75  QAFPEEQARIDAWRATLERVERGL----QAERIDDVTLSDLRRQLGTIPMHAAGLKAKLQ 130

Query: 156 ATDAAVRQRLDDFTALDKELSEHLATERSSDLSKDLSEYLAKLNEGRKNLTTLRTRLARA 215
               AV QR++     D++ +   A                KL   +  L      L   
Sbjct: 131 PRLQAVNQRVEQLKPADEQAARSQAE-------------AIKLEHAQ--LQAEAAGLQGI 175

Query: 216 LDPGQAVNAKLTQALEQIDAQLPTLWRTYYLVASSSLMDLGVWLSL----PANLAAWSDT 271
           +     +  +  Q ++ I  +   L+ +  L  S SL D   W  L    P  LA  S  
Sbjct: 176 VQQADFIALRAQQNIDIIGERRRALFTSSILQRSQSLADPSFWFDLAAATPETLANQSGV 235

Query: 272 TEIRLATEFPQSARDWGALLLRF----AFLVVP--LFLLGRLALQRGCRLPGGWADSCRN 325
                     ++ R    +L+      AFL+ P   +L  R +       P G       
Sbjct: 236 VGHWFGALIERTGRSAAGVLVVVIGFAAFLLSPGRRWLTRRTSRDPSVLHPSG------- 288

Query: 326 VAARSWPWIAVGIALHFASWARGGEVYRAVVVPAHLLLLWGELTLVWSLRAAGLAGVPQR 385
             AR+    A+ +A               +++PA    +  +   +  +  A LA V + 
Sbjct: 289 -LARATAAAAITLA--------------NLLIPAIAFFVLYQAMSILGVLPADLAAVLRP 333

Query: 386 SPLSLLFAPAAIGVLLLFLNPPAVLLAPLWALCMVAVLAVRARRGRPRVLPLLEKVLLAC 445
               L FA    G+ +  L P      P W L  V   A        +++P++  + +  
Sbjct: 334 VFFGLTFASFFYGLSIAVLAPE----RPSWRLVDVTDAAAE------KLIPVIVAMAVII 383

Query: 446 EPALCIISLLAAVFGWARLAIPFFLVGLAVAVALQ-LGAVLVALVTLLAERL-------- 496
              L + + L A               L+ AVA Q LGAV + ++ ++A R         
Sbjct: 384 AGGLALDAFLKATH-----------APLSFAVAAQGLGAVALGILAMIALRFVAREDDDE 432

Query: 497 PEKGMRALLRGLVLGLGAPAMWVVAAATLLPWMSAFPG-GPYMMRQALELNVNVGSVSFN 555
            ++G  +  R L+     P  W VAA T++  ++ F   G +   Q          + F 
Sbjct: 433 SQQGASSAWRLLI-----PVTWAVAALTVVAPLAGFVAFGRFAALQ----------IVFT 477

Query: 556 SLRVLGLVLLFYLTRSAIAVGTS 578
           +  ++ LVLL  L   AI+ G S
Sbjct: 478 TAVLMSLVLLLRLADEAISYGFS 500