Pairwise Alignments

Query, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 452 a.a., flagellar protein export ATPase FliI from Pseudomonas stutzeri RCH2

 Score =  371 bits (953), Expect = e-107
 Identities = 194/419 (46%), Positives = 273/419 (65%), Gaps = 4/419 (0%)

Query: 22  VRGRVEQVVGTIIRAVVPGVKVGELCILRNP--WENWTLRAEVVGFVKQVALLTPLGDLQ 79
           + GR+ ++VG  + A      VG  C++ N   +    + AEV+GF      L P+G L 
Sbjct: 27  LEGRLLRMVGLTLEAEGLRAAVGSRCLVINDDSYHPTEVEAEVMGFSSGKLYLMPVGSLA 86

Query: 80  GVSPATEVIPTGEILSIPVGEDLLGRVLDGLGEPMDGGPPLKPRTRYPVYAQPPNPMQRR 139
           G++P   V+P      +P+G  +LGRVLDG G  +DG   +K     P+     NP++R 
Sbjct: 87  GIAPGARVVPLVNTGRLPMGTSMLGRVLDGAGRALDGKGGMKAEDWVPMDGPVINPLKRH 146

Query: 140 IIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIGERG 199
            I  P+ +G+R ++G+LT G GQR+G+FA  G GKS LL  + +   AD+ V+ LIGERG
Sbjct: 147 PISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVGLIGERG 206

Query: 200 REVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRRSVLLMMDS 259
           REV+EFIE+ LG E  K++V+V S +D + + RL+AA   T IAEYFRD+ ++VLL+MDS
Sbjct: 207 REVKEFIENILGEESIKRSVVVASPADEAPLMRLRAAQYCTRIAEYFRDKGKNVLLLMDS 266

Query: 260 VTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSDK--GSITALYTVLVEGD 317
           +TR+ +AQREI LA GEPP  +G+PPSVF+ LP L+ERAGN+++  GSITA YTVL EGD
Sbjct: 267 LTRYAQAQREIALAIGEPPATKGYPPSVFAKLPSLVERAGNAEQGGGSITAFYTVLSEGD 326

Query: 318 DMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVDKEHKAAAQKLRK 377
           D  +PIAD  R +LDGHIVLSR+LA   HYPAID++AS+SRVM  +V  +H  A+Q+ ++
Sbjct: 327 DQQDPIADAARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPQVVSADHVRASQRFKQ 386

Query: 378 VLAKYAEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLRQGLDERSGFDDTLAALRKV 436
           + ++Y +   L+ +G Y  G D E D A+ R A +  +LRQGL E    D + A L  V
Sbjct: 387 LWSRYQQSRDLISVGAYVPGGDPETDMAIARQAEMVRYLRQGLGESENLDQSAAQLAAV 445