Pairwise Alignments

Query, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 460 a.a., ATP synthase from Herbaspirillum seropedicae SmR1

 Score =  410 bits (1053), Expect = e-119
 Identities = 217/427 (50%), Positives = 295/427 (69%), Gaps = 6/427 (1%)

Query: 18  PTVEVRGRVEQVVGTIIRAVVPGVKVGELCILRNPWE-NWTLRAEVVGFVKQVALLTPLG 76
           P    +GRV QV+GT+I A +P V++GELC L NP +   T+ AEVVGF  + ++L+ L 
Sbjct: 34  PGFSSQGRVAQVLGTLIEAHMPPVQIGELCNLFNPEQPGKTMLAEVVGFTDKASILSALS 93

Query: 77  DLQGVSPATEVIPTGEILSIPVGEDLLGRVLDGLGEPMDGGPPLKP-----RTRYPVYAQ 131
            L+GVS  T + P     SI VG+ L G VLDG G  M   P  +      R   PV   
Sbjct: 94  PLEGVSTRTVIEPLRRSHSIEVGDHLFGCVLDGFGRWMFRAPAAQENVATWRAMSPVIRD 153

Query: 132 PPNPMQRRIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCV 191
            P    R  I  P+  G+R +DG+LT G GQR+G+FA  G GK+TL+++I +GC A+  V
Sbjct: 154 APPATSRPRIATPLPTGVRAIDGLLTMGMGQRIGVFAGPGCGKTTLMAAIARGCQAEAIV 213

Query: 192 LALIGERGREVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRR 251
             LIGERGRE+ EF++H+L  E  +K V+V +TSDR+SMER +AA+TATAIAE FRD+  
Sbjct: 214 FGLIGERGRELNEFLDHELDAELIRKTVVVCATSDRTSMERSRAAFTATAIAEGFRDRGM 273

Query: 252 SVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSDKGSITALYT 311
            VLL++DS+TRF RAQREIGLAAGEPP R GF PSV++ LPRL+ERAG + +GSITA+YT
Sbjct: 274 KVLLLVDSLTRFARAQREIGLAAGEPPARGGFTPSVYTMLPRLIERAGGTPQGSITAMYT 333

Query: 312 VLVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVDKEHKAA 371
           VLV+G+  ++PI DE +S+LDGHI+L+RKLA   HYPAIDV AS+SRVM+ +  +EH+ A
Sbjct: 334 VLVDGESSSDPIGDEAKSLLDGHILLTRKLAEQGHYPAIDVLASISRVMSNVTSREHRRA 393

Query: 372 AQKLRKVLAKYAEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLRQGLDERSGFDDTLA 431
           A + R++LA+Y E+ELL+++GEYK G+D  AD A++      +FLRQ     + F +TL 
Sbjct: 394 ASRFRELLARYQEMELLIRLGEYKSGADPVADRAMELRPEQLSFLRQDTSGSADFQETLD 453

Query: 432 ALRKVVE 438
            L ++ +
Sbjct: 454 TLMEMAQ 460