Pairwise Alignments

Query, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 445 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  379 bits (973), Expect = e-109
 Identities = 200/412 (48%), Positives = 276/412 (66%), Gaps = 4/412 (0%)

Query: 24  GRVEQVVGTIIRAVVPGVKVGELCILRNPWENWTLRAEVVGFVKQVALLTPLGDLQGVSP 83
           G++ +VVG  + A      VG LC +        L AEVVGF  ++  L P+ +L+GV P
Sbjct: 28  GQLVRVVGLTLEASGCRAPVGSLCSIETMAGE--LIAEVVGFDDELLYLMPIEELRGVLP 85

Query: 84  ATEVIPTGEILSIPVGEDLLGRVLDGLGEPMDGGPPLKPRTRYPVYAQPPNPMQRRIIDR 143
              V+P GE   + VG  LLGRVLDG G P+DG   L    + P ++   NP+ RR I  
Sbjct: 86  GARVVPLGEQAGLSVGLSLLGRVLDGNGVPLDGLGALSTEQQAPRHSNAINPLSRRAITE 145

Query: 144 PISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIGERGREVR 203
           P+ +G+R ++ +LT G+GQRMG+FA +G GKS LL  + +G +AD+ V+ L+GERGREV+
Sbjct: 146 PLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVK 205

Query: 204 EFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRRSVLLMMDSVTRF 263
           EFIE  LG +GR ++V+V + +D S + RL+A  T+T IAEYFRD   +VLL+MDS+TR+
Sbjct: 206 EFIEEILGEKGRARSVVVAAPADTSPLMRLRACETSTRIAEYFRDLGYNVLLLMDSLTRY 265

Query: 264 GRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNS--DKGSITALYTVLVEGDDMTE 321
            +AQREI LA GEPP  +G+PPSVF+ LPRL+ERAGN    +GSITA YTVL EGDD  +
Sbjct: 266 AQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEGDDQQD 325

Query: 322 PIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVDKEHKAAAQKLRKVLAK 381
           PIAD +R+ILDGHIVLSR LA + HYPAID++AS+SRV   ++  EH  A +++++  + 
Sbjct: 326 PIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYSL 385

Query: 382 YAEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLRQGLDERSGFDDTLAAL 433
           Y + + L+ IG Y +GSD   D A+    A+NAFLRQ + +   F D+   L
Sbjct: 386 YQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAFLRQTMRDAFSFADSQVML 437