Pairwise Alignments

Query, 277 a.a., type III secretion apparatus lipoprotein, YscJ/HrcJ family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 254 a.a., Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) from Xanthomonas campestris pv. campestris strain 8004

 Score =  157 bits (397), Expect = 2e-43
 Identities = 81/182 (44%), Positives = 119/182 (65%), Gaps = 1/182 (0%)

Query: 20  LAVFLLMLLTGCKAELYKGLNEEQANTMLATLLRHGVPAEKLAAGK-EGYALSVERDQIV 78
           + + L +LL+GC  +LY GL E  AN MLA LL  GV AEKL     + +A++   DQ+ 
Sbjct: 8   VVLLLALLLSGCDQQLYSGLTENDANDMLAVLLTAGVDAEKLTPDDGKTWAVNAPHDQVA 67

Query: 79  RALEILRENSLPREQYQNLGKVFSGDGMIASPSEEKARLAYAISQELSDTFSRIDGVLTA 138
            AL +LR + +P E++ NLG++F  DG+I++P+EE+ R  Y +SQ+LS T S IDGV+ A
Sbjct: 68  YALNVLRTHGMPHERHANLGEMFKKDGLISTPTEERVRFIYGVSQQLSQTLSNIDGVIAA 127

Query: 139 RVHVVLASSETASETRVPASAAVFLRHGPESPVVNLIPKIRELAAKAVPGLDYERVSVML 198
            V +VL +++  S +  P+SAAVF++    S + +L+P I+ L   +V GL YE VSV L
Sbjct: 128 DVQIVLPNNDPLSASVKPSSAAVFIKFRVGSDLTSLVPSIKTLVMHSVEGLTYENVSVTL 187

Query: 199 VP 200
           VP
Sbjct: 188 VP 189