Pairwise Alignments

Query, 277 a.a., type III secretion apparatus lipoprotein, YscJ/HrcJ family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 268 a.a., type III secretion apparatus lipoprotein, YscJ/HrcJ family from Pseudomonas syringae pv. syringae B728a

 Score =  123 bits (309), Expect = 4e-33
 Identities = 71/194 (36%), Positives = 114/194 (58%), Gaps = 8/194 (4%)

Query: 17  NAALAVFLLMLLTGCKAE--LYKGLNEEQANTMLATLLRHGVPAEKLAAGKEGYALSVER 74
           +A L +  ++LL GC  E  L+ GL+E+ +N ++A L    + A K    K G  ++V  
Sbjct: 5   SAGLLLICMVLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLE-KTGVVVTVAT 63

Query: 75  DQIVRALEILRENSLPREQYQNLGKVFSGDGMIASPSEEKARLAYAISQELSDTFSRIDG 134
             + RA+ +L    LPR+   +LG +F  +G+I++P EE+AR  YA+SQEL  T S+IDG
Sbjct: 64  SDMNRAVRVLNAAGLPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATLSQIDG 123

Query: 135 VLTARVHVVLASSETASETRVPASAAVFLRHGPESPVVNLIPKIRELAAKAVPGL----- 189
           V+ ARVHVVL       E   PASAAVF++H       ++  +I+++ A ++PG+     
Sbjct: 124 VIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSTQSA 183

Query: 190 DYERVSVMLVPVRE 203
           + ++ S++ VP  E
Sbjct: 184 ESKKFSIVFVPATE 197