Pairwise Alignments

Query, 620 a.a., aminodeoxychorismate lyase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 345 a.a., conserved hypothetical protein with conserved domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  137 bits (346), Expect = 6e-37
 Identities = 103/341 (30%), Positives = 149/341 (43%), Gaps = 15/341 (4%)

Query: 26  ILLRVLAALVLLVLLACGYAGYDAWRFLHTPPASPGADVYVDVEPGATFDKVTRQLVDKG 85
           ILL VL   +LL    C  AG   + +L  P   P   VYV V+   T D +  ++   G
Sbjct: 8   ILLSVLTGALLL----CAIAGGTVYYYLFAPQFHPSKTVYVYVDRDDTADSIYNKIRQTG 63

Query: 86  AVASDWRFKLLAHYHGWETSLKAGRFLVHSNWAPFRVLDQLVNGQPVLSRITLREGLTWW 145
            V     F+ +A Y  ++ ++  GR+ +  N   + V  +   G      +T+    T  
Sbjct: 64  HVNKFTGFQWMAKYRKFDQNIHTGRYAIRPNENVYHVFSRFFRGYQEPMNLTIGSIRTLD 123

Query: 146 ETARLLEVEGFVTVEDFRAVITDPAFLRHWGIPFDTAEGFLFPDTYLIKKPTTPDRESAR 205
             AR +  +  +   +    + D AF    G    T      P+TY +    + D    R
Sbjct: 124 RLARSIGKQLMIDSAEIARQLFDSAFQTEMGYTPVTMPCLFIPETYQVYWDMSVDDFFKR 183

Query: 206 AVAGRMVDTFWR--RAAQVWPDGRPARDELRRLIILASIVEKETGQPSERGRVAGVYANR 263
                    FW   R AQ    G    +    +  LASIVE+ET    E+  VAG+Y NR
Sbjct: 184 MQTEHK--RFWNDERLAQATAIGMTPEE----VCTLASIVEEETNNNEEKPMVAGLYINR 237

Query: 264 LRTGMLLQADPTTIYGLGDTFDGNLRRSHLQDAANPYNTYRRPGLPPGPICSPGLESLRA 323
           L TGM LQADPT  + L D     +   HL+   +PYNTY   GLPPGPI  P  + L +
Sbjct: 238 LHTGMPLQADPTIKFALQDFGLRRITNEHLK-VNSPYNTYINSGLPPGPIRIPSKKGLDS 296

Query: 324 ATTPEKHGYFYFVSRND--GSHQFSATLDEHNRAVNRYQRA 362
                KH Y Y  ++ D  G+H F++   +H     +Y +A
Sbjct: 297 VLNYTKHNYIYMCAKEDFSGTHNFASNYADHMANARKYWKA 337