Pairwise Alignments

Query, 607 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 492 a.a., SEED: integral membrane sensor signal transduction histidine kinase from Desulfovibrio vulgaris Hildenborough JW710

 Score =  138 bits (347), Expect = 6e-37
 Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 13/260 (5%)

Query: 304 AQRIIERIDGLEREMAALNAQVVEAGKLSALGEMAAGIAHEINNPVAIMMEEAGWIEDVL 363
           ++ +++ ++ +  E+     Q+V+  KL++LG + +GIAH++NNP+  +      +++ +
Sbjct: 236 SRSVVKALNHMIEELENRQNQLVQEKKLASLGVLTSGIAHQLNNPLNNISTSCQILQEDI 295

Query: 364 GELQEQDAVREIGDSARQIRTQGVRCRDITHKLLSFARRSDREVHAVDINAMVTEMVELS 423
           G    +   R +    R I  + +R RDI   LL FAR  D  +    +  +V   V L 
Sbjct: 296 GSGDAELHARML----RNIHQEVLRSRDIVKGLLEFAREKDFSLVPQRLADVVERAVSLV 351

Query: 424 GQKARTVSVHVVVAMAEGLPPVAASPSE---LQQVFLNLFNNAFDAMEGSGGTLKV-ATL 479
             +     V   V ++  +PP    P +   +Q+  +NL  NA  A+    GT+ V AT 
Sbjct: 352 SSE-----VPAGVTLSASVPPDMVVPLDAQHMQEALINLLINAIQAIPAPPGTITVSATR 406

Query: 480 MSDNGMVAVNVADTGPGMPEAILQRIYDPFFTTKPVGKGTGLGLSICYGIINKMGGEIKV 539
           +    MVA+ V DTG G+P   L RI+DPFFT K VGKGTGLGLSI +G++ K GG + V
Sbjct: 407 VPGRDMVALRVEDTGTGIPPEHLGRIFDPFFTLKAVGKGTGLGLSIVFGVVKKHGGRVTV 466

Query: 540 SSIVGVGTTFQVLLPPFDPA 559
            S  G GT F + L   D A
Sbjct: 467 ESEPGKGTAFIIHLHDNDAA 486