Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1036 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  331 bits (849), Expect = 1e-94
 Identities = 200/556 (35%), Positives = 300/556 (53%), Gaps = 8/556 (1%)

Query: 377  KLHLMGEVFTHAVEGIFITDSAGTVVAVNPAFERITGVDAQSMVGRLSPALGMVPVNGTR 436
            ++ L   V+ ++ E + + D  G ++ VN AF  ITG   + ++G         P N   
Sbjct: 454  QMELAASVYNNSSEAMSVMDHKGNIITVNAAFADITGYSPKEVLGHHISQF-YCPRNKP- 511

Query: 437  SVWDEM----LEHGSWIGETRGPHRDGWQIPQWLSLVSIRDETGVILNCVGVFSDITDIK 492
            + +DE+     E G W GE    H++G +   WL++ +I D        V +FSDIT+ K
Sbjct: 512  AFYDEVNQAIKETGRWQGEMWQQHKNGKEYLIWLTVNTIYDAYQRPHRRVALFSDITEKK 571

Query: 493  QKEAQITHQANHDDLTGLPNRKHIFELLHDAIARASVRGQKLAVVFIDMDGFKFINDSYD 552
             +E  I  QAN+D LT LPNR+ + + L   I+ AS +  + A++F+D+D FK +ND+  
Sbjct: 572  AQEQLIWQQANYDPLTKLPNRRMLLDYLDREISLASRQNVRFALLFLDLDFFKEVNDTLG 631

Query: 553  HATGDQLLCDVARRLRAALRPGDMLGRLGGDEFVAAVGGISDKGHLDGIMRRLFETFAEP 612
            H  GD+LL + A R++A +R  D++ RLGGDEF   +  I D G ++     + +  AEP
Sbjct: 632  HDMGDKLLIECADRIKACIRDSDVVARLGGDEFTVLIRDIHDVGGVERAASNILKAIAEP 691

Query: 613  FEYGGMGFSVTASFGVSVYPDDGDSANALLSRADIAMYRAKDMGKNAIAVFCEEQCLEFT 672
            F+ G     ++ S G++++P+D  +  ALL  AD AMY AK+ G+N    F      +  
Sbjct: 692  FQLGPDSAYISVSIGITLFPEDASTREALLKNADQAMYAAKEQGRNRFNYFTPSMQEQAK 751

Query: 673  RRYRMDQEIKAAIAGREFRLVYQPIADARTLRVRKVEALLRWERDGAVVAPPSVFIPVAE 732
             R R+ Q+++ AI  ++F LVYQPI   ++ +V K EALLRW         P+ FIPVAE
Sbjct: 752  YRMRLIQDLRIAIEHQQFNLVYQPIVHLQSGKVHKAEALLRWHHPERGYISPTEFIPVAE 811

Query: 733  SSNAIREITRLVVEMACVQHAAWRLE-GLTLPVAVNISS-RCLNSDETISHIAACLNAYD 790
             +  I EI   V E A  Q   W  E G T+ ++VN S  +  +  E      A L   +
Sbjct: 812  DTGLIMEIGSWVFEHAARQCRDWHHEFGTTIQLSVNKSPVQFRDEGENFERWVALLEELE 871

Query: 791  VPPDALEVEITETSLMQNYERGNAMLCTLRDLGVRVSLDDFGTGYSSLQYLARMPIHALK 850
            +    + +EITE  L+         L T RD G++VSLDDFGTGYSSL YL +  I  LK
Sbjct: 872  LTHGGICIEITEGLLLDASSGVAEKLLTYRDAGIQVSLDDFGTGYSSLAYLKKFDIDYLK 931

Query: 851  IDRTFVQELLEEGGSLEIVETILGLARSLRLATVAEGVETAAQLSALRGMGVDYLQGYCL 910
            ID++F + L  +     + E I+ +A+ L +  +AEGVETA Q   L+ MG DY QGY  
Sbjct: 932  IDQSFTRNLENDASDRTLCEAIIVMAQKLGMKVIAEGVETAKQQEILKAMGCDYAQGYLY 991

Query: 911  GRPLPADDILTLCRRG 926
              P+  ++  T   +G
Sbjct: 992  SAPVSREEFETRFLKG 1007