Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1069 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  368 bits (945), Expect = e-105
 Identities = 225/652 (34%), Positives = 350/652 (53%), Gaps = 24/652 (3%)

Query: 284  AMAVLVALATALLLSRTVTRTVLRLSGWVRSIGPGNMGQRIRIDTGDELEGLANAFNGML 343
            A + L  L  +LLL R +T + +   G + SI      Q++  D   EL       + + 
Sbjct: 430  AASALFTLILSLLLGRKITASFM---GKIESIASDM--QKMADDPKLELTIKTKGSDEIA 484

Query: 344  DLLEASQRELNEAHRELERRVRDRTAQLCDANAKLHLMGEVFTHAVEGIFITDSAGTVVA 403
             + EA  + L E  +  +  VR                  VF ++ EGI +TD+   +  
Sbjct: 485  AMAEAMNKMLKERKKYRQALVR---------------AAAVFEYSAEGIMVTDADNHIEL 529

Query: 404  VNPAFERITGVDAQSMVGRLSPALGMV--PVNGTRSVWDEMLEHGSWIGETRGPHRDGWQ 461
            +NPAF +ITG   + + GR    L     P +   ++W+ +   G W GE     +DG  
Sbjct: 530  INPAFSQITGYSIEEVKGRNPSILSSHRNPPHLYDAMWESLRSTGKWEGEIWNRRKDGEV 589

Query: 462  IPQWLSLVSIRDETGVILNCVGVFSDITDIKQKEAQITHQANHDDLTGLPNRKHIFELLH 521
             P++L++  +RD+ G I++ +G+F DI+  KQ E  I ++AN D LT LPNRK + E L 
Sbjct: 590  YPEYLAITLVRDDEGQIVHHIGLFMDISRRKQYEQDIWYKANFDTLTDLPNRKLLSERLG 649

Query: 522  DAIARASVRGQKLAVVFIDMDGFKFINDSYDHATGDQLLCDVARRLRAALRPGDMLGRLG 581
              +  A   G+KLAV+ +D+D FK+IND+  H  GD LL  VA+RL+  +   D + RLG
Sbjct: 650  HELKMAEHDGRKLAVMVLDLDRFKYINDTQGHDCGDLLLKAVAKRLQTVMGSTDFIARLG 709

Query: 582  GDEFVAAVGGISDKGHLDGIMRRLFETFAEPFEYGGMGFSVTASFGVSVYPDDGDSANAL 641
            GDEFV  +  ++ +  ++   +RL ++  +PF+      SV+AS G+ +YP DG     L
Sbjct: 710  GDEFVIVLPRLAQEHAVEQYAKRLLQSMGDPFKVEQGSMSVSASLGIGLYPQDGLDVETL 769

Query: 642  LSRADIAMYRAKDMGKNAIAVFCEEQCLEFTRRYRMDQEIKAAIAGREFRLVYQPIADAR 701
            LS A+ AMY AKD G+N    F +E  L    R  M+++++ A+A  EF L YQP+ D  
Sbjct: 770  LSNAETAMYGAKDEGRNHFKYFTQEMNLALIERLGMERDLRRAVANDEFCLFYQPVVDME 829

Query: 702  TLRVRKVEALLRWERDGAVVAPPSVFIPVAESSNAIREITRLVVEMACVQHAAWRLEGLT 761
            +  V  +EALLRW+     +  P  FIPVAE    + E+ + V++ A    A     G  
Sbjct: 830  SGEVTSLEALLRWQDPEQGLVSPVRFIPVAEDMGLMGELGQWVMDKALADLARLHTLGFG 889

Query: 762  LPVAVNISS-RCLNSDETI-SHIAACLNAYDVPPDALEVEITETSLMQNYERGNAMLCTL 819
            L +A+N+S+ +C    +++   + + L+ + + P  L VEITE+ L+ N       L  +
Sbjct: 890  LSMAINVSACQCHCKRQSLDEQLRSALSRHGIAPRHLHVEITESLLLDNSHHCLDTLNNI 949

Query: 820  RDLGVRVSLDDFGTGYSSLQYLARMPIHALKIDRTFVQELLEEGGSLEIVETILGLARSL 879
            RDLG  + LDDFGTGYSSL YL + PI A+KID++FV++L        +V  I+ +++SL
Sbjct: 950  RDLGCAIYLDDFGTGYSSLSYLKKFPISAIKIDKSFVEQLPGCESDASLVRAIVNMSKSL 1009

Query: 880  RLATVAEGVETAAQLSALRGMGVDYLQGYCLGRPLPADDILTLCRRGMRLVP 931
             +  VAEG+E+  Q + L+ +G  + QGY   RPLP +++L    R     P
Sbjct: 1010 GMKLVAEGIESKDQQAFLQALGSQFGQGYLYSRPLPFEELLPWLERHQHSQP 1061