Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  337 bits (865), Expect = 2e-96
 Identities = 202/546 (36%), Positives = 299/546 (54%), Gaps = 14/546 (2%)

Query: 378 LHLMGEVFTHAVEGIFITDSAGTVVAVNPAFERITGVDAQSMVGRLSPALGMVPVNGT-R 436
           L L   V+ ++ E + + D  G ++ +N AF  ITG   +     L+  + ++  + T R
Sbjct: 455 LELAASVYNNSSEAMSVQDHKGHIITINAAFTAITGYSQEEA---LTQNIRILQSSRTPR 511

Query: 437 SVWDEM----LEHGSWIGETRGPHRDGWQIPQWLSLVSIRDETGVILNCVGVFSDITDIK 492
           S +DEM     + G W GE    ++ G +   WL++ +I D+ G +   V +FSDIT+ K
Sbjct: 512 SQYDEMNSAIRDTGYWQGELWIKNKSGEEYMVWLTINTIFDQHGQVYRRVALFSDITEKK 571

Query: 493 QKEAQITHQANHDDLTGLPNRKHIFELLHDAIARASVRGQKLAVVFIDMDGFKFINDSYD 552
           + E  I  QAN+D LTGLPNR+ + E L+  I R        A++F+D+D FK +ND+  
Sbjct: 572 EAEHIIWKQANYDPLTGLPNRRMLLEYLNTEILRIDRNHSHFALMFLDLDFFKEVNDTLG 631

Query: 553 HATGDQLLCDVARRLRAALRPGDMLGRLGGDEFVAAVGGISDKGHLDGIMRRLFETFAEP 612
           H  GD LL + A+RL+  +R  D++ RLGGDEF   + GI     ++ + + + E  AEP
Sbjct: 632 HDMGDLLLQETAKRLKGCIRESDVVARLGGDEFTVVLSGIDSPSGVERVAQSILERIAEP 691

Query: 613 FEYGGMGFSVTASFGVSVYPDDGDSANALLSRADIAMYRAKDMGKNAIAVFCEEQCLEFT 672
           +  G     ++AS G+++YPDD  S   LL  AD AMY AK+ G+N    F     ++  
Sbjct: 692 YSLGDETAYISASIGITIYPDDATSIEGLLKHADQAMYAAKEQGRNRFHYFTPS--MQEY 749

Query: 673 RRYRMD--QEIKAAIAGREFRLVYQPIADARTLRVRKVEALLRWERDGAVVAPPSVFIPV 730
            RYRM   ++++ AI  +EF L YQPI D   L V K EAL+RW      +  P  FIPV
Sbjct: 750 ARYRMALIKDLRNAINRKEFELFYQPIVDMNKLGVYKAEALIRWVHPQRGLVSPGEFIPV 809

Query: 731 AESSNAIREITRLVVEMACVQHAAWRLE-GLTLPVAVNISS-RCLNSDETISHIAACLNA 788
           AE +  I EI   V E A  Q A WR + G+ + +++N S  +  +  +T S   A L  
Sbjct: 810 AEETGLINEIGNWVFEKAAQQSARWRTQHGVEIQISINKSPIQFRDEGDTFSDWLALLRH 869

Query: 789 YDVPPDALEVEITETSLMQNYERGNAMLCTLRDLGVRVSLDDFGTGYSSLQYLARMPIHA 848
            ++  +A+ VEITE  L+         L   RD G++VSLDDFGTGYSSL YL +  I  
Sbjct: 870 LELSSNAICVEITEGLLLDASMGVTDKLLAYRDAGIQVSLDDFGTGYSSLAYLKKFDIDY 929

Query: 849 LKIDRTFVQELLEEGGSLEIVETILGLARSLRLATVAEGVETAAQLSALRGMGVDYLQGY 908
           LKID++F + L  +   + + E I+ +A  L +  +AEGVET  Q   L   G D+ QGY
Sbjct: 930 LKIDQSFTRNLESDSDGVALCEAIIVMAHKLGIKVIAEGVETQFQHDILASAGCDFAQGY 989

Query: 909 CLGRPL 914
              +P+
Sbjct: 990 LYSKPV 995