Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1094 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  381 bits (979), Expect = e-109
 Identities = 229/662 (34%), Positives = 350/662 (52%), Gaps = 36/662 (5%)

Query: 279  IGALTAMAVLVALATA--LLLSRTVTRTVLRLSGWVRSIGPGNMGQRIRIDTGDELEGLA 336
            +G + AM   + L     L+++  VTR     S   R      +   + +D  DE+  +A
Sbjct: 456  LGIMAAMCNFLFLIVLGRLIVNNLVTRIGTIASLMQRMAQNTQLQLSVPVDGRDEVAKMA 515

Query: 337  NAFNGMLDLLEASQRELNEAHRELERRVRDRTAQLCDANAKLHLMGEVFTHAVEGIFITD 396
             A N ML     S+R+                    +AN +L L   VF +  EGI +TD
Sbjct: 516  MALNAML-----SERQ--------------------EANRELSLASAVFEYCAEGIVVTD 550

Query: 397  SAGTVVAVNPAFERITGVDAQSMVGRLSPAL---GMVPVNGTRSVWDEMLEHGSWIGETR 453
                + AVNPAF +ITG   + + GR SPA+      P +    +W  + ++G W GE  
Sbjct: 551  KDNLIEAVNPAFTQITGYTLEEVKGR-SPAVLNSHQQPHHFYEQMWQSLKQYGKWQGEIW 609

Query: 454  GPHRDGWQIPQWLSLVSIRDETGVILNCVGVFSDITDIKQKEAQITHQANHDDLTGLPNR 513
               ++G   P++L++  ++D+ G ++  +G+F DI++ K+ E  I +++N+D LT LPNR
Sbjct: 610  NKRKNGQIFPEYLAITVVKDDKGRVVQHIGLFLDISNRKKYEQDIWYKSNYDALTNLPNR 669

Query: 514  KHIFELLHDAIARASVRGQKLAVVFIDMDGFKFINDSYDHATGDQLLCDVARRLRAALRP 573
            +     L   +  A  R   +AV+FID+D FK+IND Y HA GD+LL   A RL A L  
Sbjct: 670  QLYTSRLSQMLQLAEQRCCSVAVLFIDLDRFKYINDIYGHAVGDELLQVAAARLEALLEQ 729

Query: 574  GDMLGRLGGDEFVAAVGGISDKGHLDGIMRRLFETFAEPFEYGGMGFSVTASFGVSVYPD 633
             D + RL GDEFV  +G    +G ++   + + +  + PF        ++AS G+S YP 
Sbjct: 730  HDFVARLSGDEFVVVMGHTKHQGEIEQRAQNILQHLSSPFGINRNELLISASVGISCYPS 789

Query: 634  DGDSANALLSRADIAMYRAKDMGKNAIAVFCEEQCLEFTRRYRMDQEIKAAIAGREFRLV 693
            +G S   L   A+ AMY+AK  G+N    F  +       R  ++Q +++A+   EF L 
Sbjct: 790  NGTSVEVLTRNAETAMYQAKQDGRNCFGYFSPDMNNNMLARITLEQSLRSAVLQHEFCLH 849

Query: 694  YQPIADARTLRVRKVEALLRWERDGAVVAPPSVFIPVAESSNAIREITRLVVEMACVQHA 753
            YQPI D  +     +EALLRW      + PP  FIP+AE +  I  I   V++ A     
Sbjct: 850  YQPIVDTSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEETGLIEPIGEWVIQQALRDLR 909

Query: 754  AWRLEGLTLPVAVNISSRCLNSDETISHIAACLNA----YDVPPDALEVEITETSLMQNY 809
                +G+ + +A+N+S R L   +  SH A  LN     YDV P  + +EITE+ LM + 
Sbjct: 910  QCHSQGIMINMAINVSGRQLAHGDP-SHFACMLNGLLQKYDVAPQYVHIEITESILMADT 968

Query: 810  ERGNAMLCTLRDLGVRVSLDDFGTGYSSLQYLARMPIHALKIDRTFVQELLEEGGSLEIV 869
            E     L  +R LGV + LDDFGTGYSSL YL + PI  +KID++FV  +LE+     ++
Sbjct: 969  ELSLKALTAIRHLGVEIYLDDFGTGYSSLSYLKQFPISVIKIDKSFVDNMLEDRADANLI 1028

Query: 870  ETILGLARSLRLATVAEGVETAAQLSALRGMGVDYLQGYCLGRPLPADDILTLCRRGMRL 929
            + I+ + +SL +  VAEGVE+  Q S L+G+G D++QGY + +P+P  ++  L RR +R 
Sbjct: 1029 KAIITMGQSLDMRLVAEGVESEPQRSFLQGLGCDFVQGYLVAKPMPLKELEPLLRRIVRE 1088

Query: 930  VP 931
             P
Sbjct: 1089 KP 1090