Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1104 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  347 bits (889), Expect = 3e-99
 Identities = 200/539 (37%), Positives = 308/539 (57%), Gaps = 3/539 (0%)

Query: 384 VFTHAVEGIFITDSAGTVVAVNPAFERITGVDAQSMVGRLSPALGMVPVNGT--RSVWDE 441
           VF ++ +GI IT+  G ++ VN AF  +TG   +  +G+ +  L     + T  R ++  
Sbjct: 407 VFENSHDGILITNPEGLIIEVNRAFCELTGYAREEAIGQPARMLNSGHHDRTYFRQLFQV 466

Query: 442 MLEHGSWIGETRGPHRDGWQIPQWLSLVSIRDETGVILNCVGVFSDITDIKQKEAQITHQ 501
           + E G W GE     + G      +++ ++ D+ G I + VGVFSDIT  K+ + ++   
Sbjct: 467 VSERGFWKGEMWNRTKSGAVTAVLMTVSAVHDDGGRISHFVGVFSDITQQKENQRRLERL 526

Query: 502 ANHDDLTGLPNRKHIFELLHDAIARASVRGQKLAVVFIDMDGFKFINDSYDHATGDQLLC 561
           A++D LTGLPNR  + + LH A+A+A  R + LAV ++D+DGFK INDS+ H  GD+LL 
Sbjct: 527 AHYDALTGLPNRTLMSDRLHLAMAQAQRRNKLLAVCYLDLDGFKAINDSHGHQAGDRLLM 586

Query: 562 DVARRLRAALRPGDMLGRLGGDEFVAAVGGISDKGHLDGIMRRLFETFAEPFEYGGMGFS 621
           DVA RLR +LR GD   RLGGDEFV  +  ++    L+ I+ RL  + A PF   G   S
Sbjct: 587 DVAERLRRSLRGGDTAARLGGDEFVLLLNDLTALSELEQILERLLLSLAAPFALQGQTAS 646

Query: 622 VTASFGVSVYPDDGDSANALLSRADIAMYRAKDMGKNAIAVFCEEQCLEFTRRYRMDQEI 681
           V+ S GV++YP D   A+ L+  AD AMY AK  G+N   +F  EQ              
Sbjct: 647 VSGSIGVTIYPTDDADADTLVRHADQAMYAAKQSGRNRYQLFDTEQDSRARSLREAIVNA 706

Query: 682 KAAIAGREFRLVYQPIADARTLRVRKVEALLRWERDGAVVAPPSVFIPVAESSNAIREIT 741
           +AA+   +FRL YQP  +  +  +   EAL+RW+     +  P+ F+   E ++ I +I 
Sbjct: 707 RAALEQEQFRLYYQPKVNLCSGLIVGFEALIRWQHPEQGILAPAAFLVDLEETDLIVDIG 766

Query: 742 RLVVEMACVQHAAWRLEGLTLPVAVNISSRCLNSDETISHIAACLNAYD-VPPDALEVEI 800
             V+E A  Q  AW+  G   PV++NI++R L   + +  +   L  +  VPP  LE+EI
Sbjct: 767 DWVMETALAQLEAWQALGWDYPVSINIAARHLQQPDFLPRLQRALERHPAVPPRLLELEI 826

Query: 801 TETSLMQNYERGNAMLCTLRDLGVRVSLDDFGTGYSSLQYLARMPIHALKIDRTFVQELL 860
            ET+ +++  + + ++   + LGV  +LDDFGTGYSSL Y   +P   LKID++FV+++L
Sbjct: 827 LETAALEDVGQVSLVIAACQRLGVGFALDDFGTGYSSLSYFKSLPARTLKIDQSFVRDML 886

Query: 861 EEGGSLEIVETILGLARSLRLATVAEGVETAAQLSALRGMGVDYLQGYCLGRPLPADDI 919
            +  +L IVE ++GL  + + + VAEG+ET      L  +G  + QGY + RP+PA ++
Sbjct: 887 HDPEALAIVEGVVGLTSAFQRSVVAEGMETVEHGVMLLRLGCIHAQGYAIARPMPAAEV 945