Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 999 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  334 bits (856), Expect = 2e-95
 Identities = 198/562 (35%), Positives = 303/562 (53%), Gaps = 9/562 (1%)

Query: 373 DANAKLHLMGEVFTHAVEGIFITDSAGTVVAVNPAFERITGVDAQSMVGRLSPALGMVPV 432
           +A  +  L+  VF H++E I I D+ G +V  N AF  ++G   +   G+  P     P 
Sbjct: 443 EAEERRRLITHVFDHSIEAILILDATGHIVTFNNAFAELSGYTVEESAGQ-QPDFLASPC 501

Query: 433 NGT--RSVWDEMLEHG-SWIGETRGPHRDGWQIPQWLSLVSIRDETGVILNCVGVFSDIT 489
           N    R+     L+ G +W+GE     +DG   P W ++ +I +E G I+N V   +D++
Sbjct: 502 NEPDFRAQIRATLDRGENWLGEAIARRKDGSDCPVWCNIGAIVNEQGAIVNKVAFVTDLS 561

Query: 490 DIKQKEAQITHQANHDDLTGLPNRKHIFELLHDAIARASVRGQKLAVVFIDMDGFKFIND 549
           + K  +AQI   +N D LT LPNR+    +L + +      G + A+V +D+D    +ND
Sbjct: 562 EKKAAQAQIETLSNVDQLTTLPNRQWFSRILGEWLQE----GCQGALVLLDLDQLSRVND 617

Query: 550 SYDHATGDQLLCDVARRLRAALRPGDMLGRLGGDEFVAAVGGISDKGHLDGIMRRLFETF 609
           ++ HA GD+LL  V  RLR  LRP D+LGRLGGD+F   + G  D   +  ++R L +  
Sbjct: 618 AFGHAAGDELLRRVGERLRKGLRPHDILGRLGGDQFGILIDGRDDSRSVATVVRHLLDIL 677

Query: 610 AEPFEYGGMGFSVTASFGVSVYPDDGDSANALLSRADIAMYRAKDMGKNAIAVFCEEQCL 669
           A P +  G     TA  G++++P DG+    LL   D AM+ AK+   N+   F  E   
Sbjct: 678 AHPIQMQGSDVVTTACAGITLFPQDGNDVALLLRNVDTAMHHAKNSNLNSYHFFAPEMNQ 737

Query: 670 EFTRRYRMDQEIKAAIAGREFRLVYQPIADARTLRVRKVEALLRWERDGAVVAPPSVFIP 729
               R R++ E++ A+   +  L YQP  +  + ++   EALLRW      +  P+ FIP
Sbjct: 738 RVVERLRLESELRLALQLDQLELHYQPQVEIGSGQINGFEALLRWNHPELGMVSPADFIP 797

Query: 730 VAESSNAIREITRLVVEMACVQHAAWRLEGL-TLPVAVNISSRCLNSDETISHIAACLNA 788
           +AE +  I  I   V++ AC Q+  W+ +GL  + VAVN+S+      + ++ ++A L  
Sbjct: 798 LAEETRLILPIGAWVLKEACRQNRQWQDQGLPPMVVAVNLSALQFQESDLVAMVSAALMT 857

Query: 789 YDVPPDALEVEITETSLMQNYERGNAMLCTLRDLGVRVSLDDFGTGYSSLQYLARMPIHA 848
             + P  LE+EITE+ +MQ  ER   +L  L+ LGVR+S+DDFGTGYSSL YL R PI  
Sbjct: 858 SGLAPRWLELEITESVIMQEPERMVGILEELKCLGVRLSIDDFGTGYSSLSYLKRFPIDK 917

Query: 849 LKIDRTFVQELLEEGGSLEIVETILGLARSLRLATVAEGVETAAQLSALRGMGVDYLQGY 908
           +KIDR+F+++++   G   IV  ++ +A  L    +AEGVET  QL  LR       QG+
Sbjct: 918 IKIDRSFIRDVVSSQGDAAIVRMVIAMAGELERKVIAEGVETNEQLDFLRLHQCHEFQGF 977

Query: 909 CLGRPLPADDILTLCRRGMRLV 930
              RP+PA  +  L   G   +
Sbjct: 978 LCSRPVPALQVPELLAAGAEAI 999