Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 974 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  368 bits (945), Expect = e-106
 Identities = 229/648 (35%), Positives = 346/648 (53%), Gaps = 40/648 (6%)

Query: 282 LTAMAVLVALATALLLSRTVTRTVLRLSGWVRSIGPGNMGQRIRIDTGDELEGLANAFNG 341
           L A A++V L+ AL  +R ++R VL L   V  +  G            + +G+A    G
Sbjct: 334 LLAGALVVPLSQALA-NRGISRPVLNLLASVERVKAG------------QYDGIAGQAPG 380

Query: 342 MLDLLEASQRELNEAHRELERRVRDRTAQLCDANAKLHLMGEVFTHAVEGIFITDSAGTV 401
            ++        L ++ +++   +R R  QL        L   V   + E +F+TD+   +
Sbjct: 381 SVEFAS-----LFDSLQDMAHTIRSREDQL-------RLWASVLEQSREAVFVTDAENRI 428

Query: 402 VAVNPAFERITGVDAQSMVGRLSPAL--GMVPVNGTRSVWDEMLEHGSWIGETRGPHRDG 459
           + VN AF  +TG   + + GR    L  G        ++W  + E G W GE     +DG
Sbjct: 429 LLVNRAFVAVTGYTLEEVRGRTPRFLQSGRHDEAFYVNLWRSLRETGHWQGEIWDRAKDG 488

Query: 460 WQIPQWLSLVSIRDETGVILNCVGVFSDITDIKQKEAQITHQANHDDLTGLPNRKHIFEL 519
              PQW ++ ++ D  G + N + ++SD+T+ K  + +I   A HD LTGLPNR  + + 
Sbjct: 489 RIHPQWAAISAVADAAGTVSNYIAIYSDLTEHKAAQDRIQFLAQHDPLTGLPNRMLLQDR 548

Query: 520 LHDAIARASVRGQKLAVVFIDMDGFKFINDSYDHATGDQLLCDVARRLRAALRPGDMLGR 579
           L  AIA A+  G ++ V+FID+D FK INDS  H+ GD+L+  V +RL+ A+R  D + R
Sbjct: 549 LTVAIAAAAREGHEVGVLFIDLDRFKTINDSLGHSVGDELIKGVTKRLQDAVRESDTVSR 608

Query: 580 LGGDEFVAAVGGI---SDKGHL-DGIMRRLFETFAEPFEYGGMGFSVTASFGVSVYPDDG 635
           LGGDEF+  +  I    D  H+ D ++ +L      PF   G    VTAS G+SV+P DG
Sbjct: 609 LGGDEFIVVLHRIRRSEDAAHVADAVLAQL----TAPFNIAGKELRVTASIGISVFPADG 664

Query: 636 DSANALLSRADIAMYRAKDMGKNAIAVFCEEQCLEFTRRYRMDQEIKAAIAGREFRLVYQ 695
           +    L+  AD AM+ AK+ G+N    F  E       R  ++  ++ A+  +EF L YQ
Sbjct: 665 EDEEGLIKNADTAMFHAKERGRNNYQFFRPEMNARAGERLALENSLRGAVQRKEFVLFYQ 724

Query: 696 PIADARTLRVRKVEALLRWERDGAVVAPPSVFIPVAESSNAIREITRLVVEMACVQHAAW 755
           P  + R+ R+   EAL+RW R  +    P+ FIP+AE +  I EI   V+  AC Q   W
Sbjct: 725 PQVEIRSGRLVGAEALIRWRRGDSGFVSPADFIPLAEETGTILEIGDWVLAEACRQQVQW 784

Query: 756 RLE----GL-TLPVAVNISSRCLNSDETISHIAACLNAYDVPPDALEVEITETSLMQNYE 810
             +    GL  +PVAVN+SS          ++   +  Y +P   +E+E+TE+ +M+  E
Sbjct: 785 DQQWPAMGLKPVPVAVNLSSLQFRQKHFKENLLDIVGDYPLPAGRIELELTESIVMEEPE 844

Query: 811 RGNAMLCTLRDLGVRVSLDDFGTGYSSLQYLARMPIHALKIDRTFVQELLEEGGSLEIVE 870
           +  A+L  L+  G+R+S+DDFGTGYSSL YL R P+  LKID +FV++++ +   L IV 
Sbjct: 845 QVGAVLAELKQAGLRLSIDDFGTGYSSLSYLKRFPLDKLKIDASFVRDIVNDSADLAIVH 904

Query: 871 TILGLARSLRLATVAEGVETAAQLSALRGMGVDYLQGYCLGRPLPADD 918
            ++ L  SL L  VAEGVE  A+L  L  MG D  QGY   RP+PA++
Sbjct: 905 AVVSLGHSLGLKVVAEGVEHEAELLILNAMGCDIAQGYHFCRPVPAEE 952