Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 959 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  392 bits (1008), Expect = e-113
 Identities = 227/572 (39%), Positives = 321/572 (56%), Gaps = 5/572 (0%)

Query: 358 RELERRVRDRTAQLCDANAKLHLMGEVFTHAVEGIFITDSAGTVVAVNPAFERITGVDAQ 417
           R+    +  R AQL +    L L  +VF    EG+ ITD    ++ VN AF RITG   +
Sbjct: 380 RQYREDLDSRNAQLLENARDLKLAAQVFESGNEGMVITDGDNRIITVNQAFTRITGYRPE 439

Query: 418 SMVGRLSPAL---GMVPVNGTRSVWDEMLEHGSWIGETRGPHRDGWQIPQWLSLVSIRDE 474
            +VG+ +PA+   G    +  R +W ++ + G+W GE     +DG   P+WL++ S+RDE
Sbjct: 440 EVVGQ-NPAIFSSGRHDADFYRQMWHQLRDTGAWSGEIWNRRKDGSLYPEWLNISSVRDE 498

Query: 475 TGVILNCVGVFSDITDIKQKEAQITHQANHDDLTGLPNRKHIFELLHDAIARASVRGQKL 534
            G   + +  FSDIT+ K  EAQ+ H A +D LT LPNR  + + L  AIA A   G  L
Sbjct: 499 GGQASHYIAAFSDITERKAAEAQVRHLAEYDALTNLPNRVLLQDRLGQAIAAARRAGSCL 558

Query: 535 AVVFIDMDGFKFINDSYDHATGDQLLCDVARRLRAALRPGDMLGRLGGDEFVAAVGGISD 594
           A++F+D+D FK INDS  H  GDQ+LC V  RL  A+R  D + RLGGDEFV  +  +  
Sbjct: 559 ALLFLDLDRFKNINDSLGHTVGDQVLCQVGERLLTAVRASDTVSRLGGDEFVLLLPQLES 618

Query: 595 KGHLDGIMRRLFETFAEPFEYGGMGFSVTASFGVSVYPDDGDSANALLSRADIAMYRAKD 654
                 +  +L  T A P        +VT S G++V+P+DG+  + LL  AD AMY AK+
Sbjct: 619 PAQAASVAEKLLLTLATPLAIDDYELAVTPSIGIAVFPEDGEDGDTLLKNADAAMYVAKE 678

Query: 655 MGKNAIAVFCEEQCLEFTRRYRMDQEIKAAIAGREFRLVYQPIADARTLRVRKVEALLRW 714
            G+N    F        ++R  ++  ++ A+A +E  L YQP  D  +  +   EALLRW
Sbjct: 679 SGRNNYQYFTAAMNARVSQRLLLENNLRQALARQELALHYQPQYDLHSGTLVGCEALLRW 738

Query: 715 ERDGAVVAPPSVFIPVAESSNAIREITRLVVEMACVQHAAWRLEGL-TLPVAVNISSRCL 773
            +    + PP  FIPVAE +  I  I + V+  AC Q  AW+  GL  L VAVNIS+   
Sbjct: 739 RQPEQGLIPPDRFIPVAEETGLILPIGQWVLREACRQAQAWQDAGLPPLVVAVNISAVQF 798

Query: 774 NSDETISHIAACLNAYDVPPDALEVEITETSLMQNYERGNAMLCTLRDLGVRVSLDDFGT 833
                 + +   L A  + P  LE+E+TE+ LM++ ER    L  L+ +G+R++LDDFGT
Sbjct: 799 RQANLAALVQEALAASGLSPCWLELELTESMLMEDGERHTQTLAQLKAMGIRLALDDFGT 858

Query: 834 GYSSLQYLARMPIHALKIDRTFVQELLEEGGSLEIVETILGLARSLRLATVAEGVETAAQ 893
           GYSSL YL R  +  LKIDR+F+++L ++     I   I+G+AR L L T+AEGVET  Q
Sbjct: 859 GYSSLAYLKRFSLDKLKIDRSFIRDLPQDAEDAAITTAIIGMARDLGLETLAEGVETEQQ 918

Query: 894 LSALRGMGVDYLQGYCLGRPLPADDILTLCRR 925
            S L   G   +QG+   RP+PAD+I  L  R
Sbjct: 919 WSFLAERGCAQMQGFLRARPMPADEITALLGR 950