Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  379 bits (972), Expect = e-109
 Identities = 221/549 (40%), Positives = 316/549 (57%), Gaps = 10/549 (1%)

Query: 374  ANAKLHLMGEVFTHAVEGIFITDSAGTVVAVNPAFERITGVDAQSMVGRLSPAL--GMVP 431
            A A+L L  +VF ++ E I I D    +++VN AF  ITG   + ++G+    L  G   
Sbjct: 720  AEAELKLAEKVFANSPEAIMICDQGNRIISVNRAFCDITGYAQEEVLGQDPRMLASGRHD 779

Query: 432  VNGTRSVWDEMLEHGSWIGETRGPHRDGWQIPQWLSLVSIRD-ETGVILNCVGVFSDITD 490
             +  R +W+ + + G+W GE     ++G   P+W+++ ++ D ++G + + + +FSDIT+
Sbjct: 780  KDFYRQMWEILRDTGAWAGEIWDRRKNGEIYPKWMTINAVHDTQSGALTHYITLFSDITE 839

Query: 491  IKQKEAQITHQANHDDLTGLPNRKHIFELLHDAIARASVRGQKLAVVFIDMDGFKFINDS 550
             K+ EA+I H A+HD LTGLPNR  +   L  ++A A   G K+AV+F+D+D FK INDS
Sbjct: 840  RKETEARIHHLAHHDPLTGLPNRFTLEARLEQSLADARRHGHKVAVMFMDLDRFKTINDS 899

Query: 551  YDHATGDQLLCDVARRLRAALRPGDMLGRLGGDEFVAA---VGGISDKGHLDGIMRRLFE 607
              HA GD LL ++A RLR+A+R  D + RLGGDEFV     V G +D  H+ G   ++ E
Sbjct: 900  LGHAVGDSLLMEIAHRLRSAVRESDTVARLGGDEFVVVLPDVEGANDAAHVAG---KIIE 956

Query: 608  TFAEPFEYGGMGFSVTASFGVSVYPDDGDSANALLSRADIAMYRAKDMGKNAIAVFCEEQ 667
              A     G      +AS G+S+YPDDG++   ++  AD AMY AK +G+N    F    
Sbjct: 957  DVARSLRVGAHELHTSASIGISLYPDDGETVPTVMQNADTAMYHAKAIGRNNFQFFASAM 1016

Query: 668  CLEFTRRYRMDQEIKAAIAGREFRLVYQPIADARTLRVRKVEALLRWERDGAVVAPPSVF 727
                T R  ++++++ A+   E  L +QP       RV  VEALLRW      + PP  F
Sbjct: 1017 NRAATERLELERKLRQAMVNDELELHFQPQFALAADRVTGVEALLRWRHPEDGLIPPDRF 1076

Query: 728  IPVAESSNAIREITRLVVEMACVQHAAWRLEGL-TLPVAVNISSRCLNSDETISHIAACL 786
            IP+AE +  I  I   V++ AC Q  AW  +GL  L +AVN+S+R L   E  S +AA L
Sbjct: 1077 IPIAEETGLIVGIGDWVLQAACRQLKAWLDQGLPPLRMAVNLSTRQLKEKEFPSRVAAIL 1136

Query: 787  NAYDVPPDALEVEITETSLMQNYERGNAMLCTLRDLGVRVSLDDFGTGYSSLQYLARMPI 846
                +P   LE+EITE+ +M+  E     L  L D+GV +++DDFGTGYSSL YL   PI
Sbjct: 1137 QETGLPAVLLELEITESGVMERPEEAITTLQALNDMGVTLAIDDFGTGYSSLSYLKLFPI 1196

Query: 847  HALKIDRTFVQELLEEGGSLEIVETILGLARSLRLATVAEGVETAAQLSALRGMGVDYLQ 906
              LKIDR+FV+++  +     I    + LA SL L  VAEGVET+AQL  L   G D +Q
Sbjct: 1197 DRLKIDRSFVRDIERDPDDAAIARGTIALAHSLGLEVVAEGVETSAQLDMLAADGCDEVQ 1256

Query: 907  GYCLGRPLP 915
            GY   RPLP
Sbjct: 1257 GYFFSRPLP 1265