Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1126 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  367 bits (943), Expect = e-105
 Identities = 203/545 (37%), Positives = 300/545 (55%), Gaps = 3/545 (0%)

Query: 377  KLHLMGEVFTHAVEGIFITDSAGTVVAVNPAFERITGVDAQSMVGRLSPAL--GMVPVNG 434
            +L L G V  +  +G+ ITD+ G +++VN AF  ITG  A   +G+L   L         
Sbjct: 572  QLRLAGVVMENTADGVMITDARGVILSVNKAFTDITGYTAAEALGQLPSLLRSDRQEPEF 631

Query: 435  TRSVWDEMLEHGSWIGETRGPHRDGWQIPQWLSLVSIRDETGVILNCVGVFSDITDIKQK 494
             R +W+ +   G W GE     ++G   P+WL++ ++ D+ G  +N VGVFSDI+ IK  
Sbjct: 632  YRLMWETLASTGIWRGEIWNRRKNGALFPEWLTINAVLDQEGKPVNYVGVFSDISAIKHS 691

Query: 495  EAQITHQANHDDLTGLPNRKHIFELLHDAIARASVRGQKLAVVFIDMDGFKFINDSYDHA 554
            + ++   A+ D LTGLPNR    + L  A+ RA   GQ+LAV+ +D+DGFK +NDS  H 
Sbjct: 692  QDELERLAHFDPLTGLPNRTLFHDRLQHALERAQRYGQELAVLLLDLDGFKTVNDSLGHP 751

Query: 555  TGDQLLCDVARRLRAALRPGDMLGRLGGDEFVAAVGGISDKGHLDGIMRRLFETFAEPFE 614
            TGD LL   A R +  +R  D + RLGGDEF   +  ++       ++++L +   EPF+
Sbjct: 752  TGDLLLQQAAHRFKECVRVEDTVSRLGGDEFAIILNNLAQGTDAISVVKKLLQALQEPFD 811

Query: 615  YGGMGFSVTASFGVSVYPDDGDSANALLSRADIAMYRAKDMGKNAIAVFCEEQCLEFTRR 674
              G    VT S G+++ P DGD+  AL+  AD AMY AK+ G+N+   +  +       R
Sbjct: 812  LDGTAALVTTSIGIAIAPLDGDTPEALVRNADTAMYGAKEGGRNSYRFYQADMTRRAQER 871

Query: 675  YRMDQEIKAAIAGREFRLVYQPIADARTLRVRKVEALLRWERDGAVVAPPSVFIPVAESS 734
               ++ ++ A+   EF + YQP  +     +   EALLRW      +  P+ FIP+AE +
Sbjct: 872  LTQERSLRRALEEGEFEVWYQPKLELADGSLCGAEALLRWRDPARGLVSPAEFIPLAERT 931

Query: 735  NAIREITRLVVEMACVQHAAWRLEGLTL-PVAVNISSRCLNSDETISHIAACLNAYDVPP 793
              I  I  LV++  C Q   W   GL    +AVN+++  +   +  + +   L  + +P 
Sbjct: 932  GLIVPIGELVLDQVCRQARQWADRGLLAGRIAVNVAALQIERSDYAATLRQALEKHGLPA 991

Query: 794  DALEVEITETSLMQNYERGNAMLCTLRDLGVRVSLDDFGTGYSSLQYLARMPIHALKIDR 853
             ALEVE+TE+ +M++      +LC ++ LGV  ++DDFGTGYSSL YL  +PI+ LKIDR
Sbjct: 992  TALEVEVTESLIMESPNHARQVLCDIQTLGVTTAVDDFGTGYSSLAYLKVLPINHLKIDR 1051

Query: 854  TFVQELLEEGGSLEIVETILGLARSLRLATVAEGVETAAQLSALRGMGVDYLQGYCLGRP 913
             FV +L      + I   I+ L  SL     AEG+ET  QL  LRG G D  QGY  GRP
Sbjct: 1052 AFVADLPHNANDVAIARAIIALGHSLGFHITAEGIETQEQLEFLRGAGCDQGQGYLFGRP 1111

Query: 914  LPADD 918
            +PA D
Sbjct: 1112 MPAAD 1116



 Score = 36.6 bits (83), Expect = 9e-06
 Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 25/205 (12%)

Query: 349 SQRELNEAH--RELERRVRDRTAQLCDANAKLHLMGEVFTHAVEGIFITDSAGTVVAVNP 406
           S  +LNE      + R + +R     +   +  L+G +  HA   I++ D+ G +   N 
Sbjct: 421 SAMQLNELPVLHAVVRDISERKQAEAELERQRSLLGAIVDHAPSLIYMFDTEGRLRLGNR 480

Query: 407 AFERITGVDAQSMVGRL-----SPALGMVPVNGTRSVWDEMLEHGSWIGETRGPHRDGWQ 461
            FE++ G    ++ G L     SPAL +   +    V    ++ G  +         G Q
Sbjct: 481 LFEKVIGRPRAAVEGLLRESFISPALAVQHRHNDELV----MQSGQPMRFEEQAFDGGVQ 536

Query: 462 IPQWLSLVSIRDETGVILNCVGVFSDITDIKQKEAQITHQANHDDLTGLPNRKHIFELLH 521
                +   +    G +   +G+ +DIT+IKQ   Q+        L G+     + E   
Sbjct: 537 RTYLTTKCPLPGPDGSLRGVLGISTDITEIKQTTEQLR-------LAGV-----VMENTA 584

Query: 522 DAIARASVRGQKLAV--VFIDMDGF 544
           D +     RG  L+V   F D+ G+
Sbjct: 585 DGVMITDARGVILSVNKAFTDITGY 609