Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  352 bits (904), Expect = e-101
 Identities = 212/559 (37%), Positives = 306/559 (54%), Gaps = 12/559 (2%)

Query: 374 ANAKLHLMGEVFTHAVEGIFITDSAGTVVAVNPAFERITGVDAQSMVGRLSPAL---GMV 430
           A  +L  +      +   I ITD+ G +  VNP F R TG  A+  VG L P++   G  
Sbjct: 318 AELQLRQLSRAVEQSPATIVITDTNGVIEYVNPKFTRTTGYSAEEAVG-LKPSVLKSGET 376

Query: 431 PVNGTRSVWDEMLEHGSWIGETRGPHRDGWQIPQWLSLVSIRDETGVILNCVGVFSDITD 490
           P+   + +W  +   G W G      R+G    +  ++  I D+   I + V V  DIT+
Sbjct: 377 PLEVYQELWSTIASGGQWEGVFHNRRRNGELYWEHATISPITDDNQRITHFVAVKEDITE 436

Query: 491 IKQKEAQITHQANHDDLTGLPNRKHIFELLHDAIARASVRGQKLAVVFIDMDGFKFINDS 550
            +++E +I   A  D+LTGLPNR  + + +   +A A    + LA++FID+D FK +NDS
Sbjct: 437 KRRQEDRIHQLAYFDELTGLPNRTLLHDRVSQCLAAAEREQETLALLFIDLDNFKTVNDS 496

Query: 551 YDHATGDQLLCDVARRLRAALRPGDMLGRLGGDEFVAAVGGISDKGHLDG---IMRRLFE 607
             H TGD+LL  VA+RL+  +R  D + RLGGDEFV  +        LDG   + R++ +
Sbjct: 497 LGHFTGDRLLQSVAQRLKGCVRDSDTVSRLGGDEFVVVLAD----AQLDGASQVARKIID 552

Query: 608 TFAEPFEYGGMGFSVTASFGVSVYPDDGDSANALLSRADIAMYRAKDMGKNAIAVFCEEQ 667
              +PF   G   +VT S G+S++P D     +LL  AD AMY+AK+ G+NA   F  E 
Sbjct: 553 RVGQPFVIDGHQLTVTPSIGISLFPHDARDFQSLLKNADTAMYQAKESGRNAYQFFTAEM 612

Query: 668 CLEFTRRYRMDQEIKAAIAGREFRLVYQPIADARTLRVRKVEALLRWERDGAVVAPPSVF 727
            +    R  ++  ++ A+  +EF L YQP  D  + RV   EAL+RW      + PP+ F
Sbjct: 613 NVLAFERLVLENALRQAVERQEFVLHYQPQVDMGSGRVIGAEALVRWLHPELGMVPPARF 672

Query: 728 IPVAESSNAIREITRLVVEMACVQHAAWRLEGL-TLPVAVNISSRCLNSDETISHIAACL 786
           IPVAE S  I  I   V+  AC Q+ AW+  GL  +PVAVN+S+  L   E    +A  L
Sbjct: 673 IPVAEDSGLIGAIGDWVLYEACRQNRAWQEAGLPAIPVAVNLSAVQLRQSELHESVAELL 732

Query: 787 NAYDVPPDALEVEITETSLMQNYERGNAMLCTLRDLGVRVSLDDFGTGYSSLQYLARMPI 846
               +    LE+E+TE ++M++ E     L  L ++GV +S+DDFGTGYSSL YL R PI
Sbjct: 733 RRTGLESRYLELELTERTVMEDAEATVRCLRRLDEMGVMLSIDDFGTGYSSLSYLKRFPI 792

Query: 847 HALKIDRTFVQELLEEGGSLEIVETILGLARSLRLATVAEGVETAAQLSALRGMGVDYLQ 906
             LKID++FV++++ +     I   I+ +  SLRL  +AEGVETA QL  L   G D  Q
Sbjct: 793 DKLKIDQSFVRDIVADADDQAIAVAIISMGHSLRLRVIAEGVETAEQLEILHRHGCDEAQ 852

Query: 907 GYCLGRPLPADDILTLCRR 925
           G+  GRP+PAD+      R
Sbjct: 853 GFHFGRPMPADEFAAYLAR 871