Pairwise Alignments

Query, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1072 a.a., sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  365 bits (937), Expect = e-105
 Identities = 220/585 (37%), Positives = 318/585 (54%), Gaps = 5/585 (0%)

Query: 347  EASQRELN-EAHRELERRVRDRTAQLCDANAKLHLMGEVFTHAVEGIFITDSAGTVVAVN 405
            E S R L+ E  R L   +RD ++++     +L+L   VF +A+EGI ITD++G ++AVN
Sbjct: 473  EVSVRSLDIEGERTLLVALRDISSRI-HTEHRLNLFELVFRNALEGILITDASGAILAVN 531

Query: 406  PAFERITGVDAQSMVGRLSPAL--GMVPVNGTRSVWDEMLEHGSWIGETRGPHRDGWQIP 463
            PAF  ITG + +  VGR    L            +W  + E G+W GE      +G   P
Sbjct: 532  PAFTTITGWNERDAVGRNPRILKSNRHDRGFYERLWHSLHERGAWEGEIWNRRINGENYP 591

Query: 464  QWLSLVSIRDETGVILNCVGVFSDITDIKQKEAQITHQANHDDLTGLPNRKHIFELLHDA 523
            +WLS+ +IRDE+G   N V +F DI+D+K KEAQI +Q  HD LTGLPNR  + E L   
Sbjct: 592  EWLSISAIRDESGATTNYVALFHDISDLKAKEAQIRYQGMHDALTGLPNRALLLERLAGE 651

Query: 524  IARASVRGQKLAVVFIDMDGFKFINDSYDHATGDQLLCDVARRLRAALRPGDMLGRLGGD 583
            +      G+   +++ID+D FK INDS  H  GD+ + +VA  L   +RP D L RLGGD
Sbjct: 652  LKEGQGTGRLCGLLYIDIDNFKTINDSLGHEAGDKFIAEVAEHLTLLIRPEDTLSRLGGD 711

Query: 584  EFVAAVGGISDKGHLDGIMRRLFETFAEPFEYGGMGFSVTASFGVSVYPDDGDSANALLS 643
            E+V  V    ++  +  +  R+   F++P         V  S G++++P DG   + LL+
Sbjct: 712  EYVILVANPGEEREVVLVAERILHHFSQPIALLDRELHVGLSIGIAIHPADGKGPDELLT 771

Query: 644  RADIAMYRAKDMGKNAIAVFCEEQCLEFTRRYRMDQEIKAAIAGREFRLVYQPIADARTL 703
             AD+AMYRAK  GKN    F          R  ++  ++ A+   E    +QP  D  T 
Sbjct: 772  NADLAMYRAKAQGKNTYERFSPHLHDRIRSRMELEGRLRHALRHGEIVPHFQPRVDLATG 831

Query: 704  RVRKVEALLRWERDGAVVAPPSVFIPVAESSNAIREITRLVVEMACVQHAAWRLEGL-TL 762
            R+   EAL RW         P  FIPVAE    I ++   ++  +     A   EGL  +
Sbjct: 832  RIVGAEALARWTLPDGTRISPGEFIPVAEDLGLIFDLGEHMLRSSLAFTRALMDEGLPDI 891

Query: 763  PVAVNISSRCLNSDETISHIAACLNAYDVPPDALEVEITETSLMQNYERGNAMLCTLRDL 822
             +AVN+S       + +  + A L    VPP+ LE+EITE+++M +  R    L  L  L
Sbjct: 892  TMAVNLSLVQCRHADLVGRVLAALRDTGVPPERLELEITESAIMSDVTRTLRRLDRLAAL 951

Query: 823  GVRVSLDDFGTGYSSLQYLARMPIHALKIDRTFVQELLEEGGSLEIVETILGLARSLRLA 882
            G+ +++DDFGTGYSSL +L  MP+H LKID++FV++L    GS  I  T+L +AR+L L 
Sbjct: 952  GITLAVDDFGTGYSSLYHLKHMPLHTLKIDQSFVRDLPHVAGSRTIALTMLAMARNLDLD 1011

Query: 883  TVAEGVETAAQLSALRGMGVDYLQGYCLGRPLPADDILTLCRRGM 927
             +AEGVET AQ+  LR  G   +QG+     +P D +  L RRG+
Sbjct: 1012 VIAEGVETGAQMHFLRDHGCRVVQGFLFSPAVPGDRLFDLLRRGV 1056