Pairwise Alignments

Query, 489 a.a., RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 525 a.a., multidrug transporter from Burkholderia phytofirmans PsJN

 Score =  265 bits (677), Expect = 3e-75
 Identities = 173/522 (33%), Positives = 264/522 (50%), Gaps = 42/522 (8%)

Query: 2   LATAMLAATLAGCSFGPDHARPAMDL-------------PDAWRPGTADTGTVQDG---- 44
           L    +A   AGC+  P + RPA                P A +PG   T   Q G    
Sbjct: 6   LIAVAVALFAAGCTMAPKYERPAPPTTSTFPTGGVYDTQPGATQPGAGQTDATQTGKQQP 65

Query: 45  ------------------WWKGFGDPALDALVASALDHNRDLAKAIANVDEARAQLGLAR 86
                             W   F DP +  L+  AL +NRDL  ++ N+  + AQ  + R
Sbjct: 66  GATNAARSANGQAAVDIGWRDFFVDPRMQRLIEIALKNNRDLRVSVLNMQASAAQYRIVR 125

Query: 87  ANQMPRVDAQGASQRQRYSLEGFNSFDESTRVQDLHNAGGVLSYEMDLWGRYRRASEAAR 146
           A  +P +DA  +  +QR       SF   T + + ++ G   S+E+D +GR +   + A 
Sbjct: 126 AGLLPTLDAAASQSKQRTPKN--LSFAGQT-ITNTYSVGLNASWEIDFFGRIQSLKDQAL 182

Query: 147 ADLLSTMAARDTVRLALTAQVARTYFDLRAYDQQLQVARDTLASRESTQELRKVRFELGL 206
           A  L+T  AR    ++L +QVA  Y  +   D  L+V ++TL + + +  + K++F+ G 
Sbjct: 183 AQYLATAQARKAAEISLVSQVATQYMTVLELDDLLKVTQNTLKTSQESYRIAKLQFDNGT 242

Query: 207 TSELDYRQAIAEAAAARSTVHTLQYNVSASEAALGVLTGKSPRDIVTGTVERGLAVDAVP 266
            SELD RQ+      A++ +       + ++ AL +L G+   D     +  G+ +D   
Sbjct: 243 GSELDLRQSQTVVEQAQANLQQQMRLRAQADNALVLLIGEPLPD----DLPPGMTLDNQN 298

Query: 267 VPPSVPAGLPSALLERRPDIVQAEQQLAAASANIGVAKAAYFPSISLTGLLGYESSDLTR 326
           +   +PAGLPS LL RRPDI++AE+ L AA+ANIG A+AA+FP +SLTG  G  S  L  
Sbjct: 299 LLTDIPAGLPSDLLTRRPDIMEAEENLLAANANIGAARAAFFPKVSLTGSFGTLSPSLGG 358

Query: 327 LFTGPAGTWRYAGSVSMPIFDFGRIKAGVEAAEARQRAALAGYEKAVQDAFREAQDALVA 386
           LF   +  W +A S+++PIF+ G+  A ++ A  +++  +A YEKA+Q AFR+  DAL A
Sbjct: 359 LFKPGSAAWSFAPSITLPIFEGGQNLANLDLANIQKKVQIATYEKAIQSAFRDVADALAA 418

Query: 387 NRKARGVVEAQTTQVTALRRSLHLAKLRYDNGYSSYLEVLDAERSLFDVEISLASAQRDQ 446
                  ++A      A +R L L+ LRY NG  SYL VL A+  L+  +  L +A+ ++
Sbjct: 419 RGTYDQQIQALERNTFAEQRRLDLSNLRYTNGVDSYLTVLTAQTDLYSSQQLLVTARMER 478

Query: 447 LVAVVEVYRALGGGWAGIAPLAPNAADAPEAPAQDGKPVAAA 488
           L  +V +Y+ LGGGW       P  ADAP        PVAA+
Sbjct: 479 LQNLVTLYQVLGGGWIEHNGDQPRPADAPVDYGAASAPVAAS 520