Pairwise Alignments

Query, 812 a.a., DNA gyrase, A subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 782 a.a., DNA topoisomerase 4 subunit A from Phaeobacter inhibens DSM 17395

 Score =  408 bits (1048), Expect = e-118
 Identities = 257/713 (36%), Positives = 408/713 (57%), Gaps = 55/713 (7%)

Query: 7   IEKELRKSYLEYSLSVIIGRAIPDARDGLKPVHRRIMFAQHELGNGYTRPPKKSARVVGD 66
           + + + + YL Y+LS I+ RA+PDARDGLKPVHRRI++A   L    T    KSA++ GD
Sbjct: 23  LRRAIGERYLTYALSTIMHRALPDARDGLKPVHRRILYAMSRLRLTSTGGFLKSAKISGD 82

Query: 67  VIGKYHPHGDSAVYDALVRMAQDFSMRDPLVDGQGNFGSIDGDAAAAMRYTEVRMSRLAG 126
            +G +HPHGD+A+YDA+ R+AQDF++R PLVDGQGNFG+IDGD  AA RYTE RM+ +A 
Sbjct: 83  TMGDFHPHGDAAIYDAMARLAQDFNVRYPLVDGQGNFGNIDGDNPAASRYTEARMTFVAE 142

Query: 127 EFLADIDKETVDFRPNYDNTLLEPSVLPTKVPNLLLNGSSGIAVGMATNIPPHNLGELCG 186
             L  + +  VDFR NYD  L EP+VLP   PN+L NG++GIAVGMATNIPPHN+GEL  
Sbjct: 143 AMLEGLSENAVDFRDNYDGRLTEPAVLPATFPNILANGAAGIAVGMATNIPPHNIGELID 202

Query: 187 ALLHIVDEPGCTVEDLMDHVKGPDFPTAG-FVYAGQGLYDAYTTGRGTVKVRGKVEIEER 245
           A LH++  P    + L+++V GPDFPT G  V   + +  AY TGRG+ ++R   E+E+ 
Sbjct: 203 ACLHLIKTPDARDDTLLNYVPGPDFPTGGIIVEPKENIAKAYNTGRGSFRLRCTHEVEDL 262

Query: 246 KKGLQAIVIREIPFALNKSSLVEKIAALVNERKIDGVADLRDESDRKGIRVVIDLKRGTI 305
            +G   IVI EIP+ + KS L+EKIA L+  +KI  +AD+RDES  + IR+V++ K   +
Sbjct: 263 GRGQWQIVITEIPYQVQKSKLIEKIAELIQTKKIPILADVRDES-AEDIRIVLEPKSKNV 321

Query: 306 -PDIVVNALYKYTPLESSFGINMLAVV-GNRPQLLNLKQALEIFLEHRREVIIRRTRYDL 363
            P++++N +++ + LE  F +NM  ++ G  P++ ++K+ L  FL+HRR+V+ RR+++ +
Sbjct: 322 DPEVLMNMMFRNSDLEIRFSLNMNVLIDGVTPKVCSMKEVLRAFLDHRRDVLQRRSQHRM 381

Query: 364 RKAEARAHILEGLRIALDNIDEVVALIRASKTPQ-------------------DAKDALM 404
            K + R  +LEG  IA  N+D V+ +IR    P+                   D     +
Sbjct: 382 DKIDHRLEVLEGFIIAFLNLDRVIDIIRYDDDPKAALMRENWSLDHPRAYTEADYVSPAI 441

Query: 405 GRFTLSEAQAQAILDMRLQRLTNLEHEKLIEEYNELLKKIEFFRSVLENPEVLRSVIREE 464
           G   L+E QA+AIL+MRL+ L  LE  +L+ E + L ++      +L + ++  S I E+
Sbjct: 442 GAGELTEVQAEAILNMRLRSLRRLEEIELVRERDALREERAGLVELLASEDLQWSRIAEQ 501

Query: 465 IGELRDTFAT-----KRRTEVLEE-ELDGIDIEDLIPDEDVVITLSRRGYIKRTT--LDN 516
           + + +  F        RRT   E  E++ + +E +I  E + +  S+ G+I+  T  +D 
Sbjct: 502 LKDTKKQFGKTYEGGPRRTRFAEAGEVEEVPLEAMIDREPITVVCSQMGWIRAMTGHIDL 561

Query: 517 YQQQR-RGGKGIAGVHTSEDDFVQDFLTTTNHQYLLLFTNHGRMHQIKVHRVPEGSRTAK 575
            ++ + + G G   +  +E         TT+   LL+F ++GR + I    +P G     
Sbjct: 562 GRELKFKDGDGPRFIFHAE---------TTDR--LLVFASNGRFYTISASNLPGG--RGM 608

Query: 576 GVHIANLVQLDKDELVTNVLTVREFAEDRYFLFVTRRGMVKRSSASLYAKCRKTGLIAVG 635
           G  +  +V L  +  + ++L      E R  +          +   + A+ R +G   + 
Sbjct: 609 GEPLRLMVDLPNEVEIVDILI--HNPEGRLLVASDAGNGFICAEKDIVAQTR-SGKQVLN 665

Query: 636 LRPDDEL-IMVREVDEHCHIVLTTGDGMAIRFQCEDVRPMGRSATGVKGIALR 687
           ++ DD   I +R   +  H+ + + +G  + F  E++  + R     KG+ L+
Sbjct: 666 VKDDDRAKICIRVTGD--HVAVVSENGKFLVFAVEEMPELTRG----KGVRLQ 712