Pairwise Alignments

Query, 614 a.a., aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) (from data) from Desulfovibrio vulgaris Miyazaki F

Subject, 599 a.a., aspartate--tRNA ligase from Bifidobacterium breve UCC2003

 Score =  496 bits (1276), Expect = e-144
 Identities = 271/607 (44%), Positives = 374/607 (61%), Gaps = 32/607 (5%)

Query: 24  RSHDCATLTAADTGAEVCLMGWVQYRRDHGGLIFVDLRDRQGLTQIVFSPDVNPAAHERA 83
           R+H    +T A  G +V L GWV  RRDHGG+ F+DLRD  GL Q+V   +      + A
Sbjct: 7   RTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDATGLVQVVIYDE------DMA 60

Query: 84  HIIRSEYVLAIRGTVRPRPEGMTNPGMKTGEIEVYVSEWKLLNTSKTPAFVIEDRTE--- 140
             +RSE+V+ + G VR RP+G  N  + TG+IEV     ++L  +    F +    E   
Sbjct: 61  RPLRSEFVIQVTGDVRLRPDGNENTHLATGKIEVVAESIEVLAKADALPFQVSTALENES 120

Query: 141 ----ASENLRLQYRYLDLRRPRMANNFIVRHKAAQATRRYLDELGFLEIETPYLTKSTPE 196
                 E++RL+YRYLDLRRP M +N  +R   A+A R  L+++ F E+ETP   KSTPE
Sbjct: 121 ENKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEDMDFTEVETPTFIKSTPE 180

Query: 197 GARDFLVPSRLNQGQFYALPQSPQLFKQLLMMSGMERYYQIVRCFRDEDMRADRQLEFTQ 256
           GARDF+VP+RL  G +YALPQSPQL KQLLM+SG+ERYYQ+ RC+RDED RADRQ EFTQ
Sbjct: 181 GARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQ 240

Query: 257 IDIEMSFVDEEQVMAMAEGLMARVFRDALDREIATPFPRMSYDDAMARYGVDKPDTRFGL 316
           +D+EM++VD+E VMAM E ++A +++ A   E+  P PR+++ DAM +YG DKPD RFG 
Sbjct: 241 LDMEMAYVDQEDVMAMTEKVIAAIWKSA-GYEVQLPLPRITWKDAMDKYGSDKPDLRFGN 299

Query: 317 ELQDVTHIVRGSNFKLFATAELVKAMRVPGGETMTRKEIDEFTEFVKIYGAQGLAWIKIR 376
            L ++T   + + F++F  A  V A+   GG    R++ D + ++ +  GA+GLA++   
Sbjct: 300 PLVELTDYFKNTPFRVF-QAPYVGAVVFKGGAATPRRQFDAWQDWARQRGAKGLAYVVFG 358

Query: 377 PD-EWQSPIAKFLSDEERAGLKDALGLETGDIVFFQAGAPGMVNAALGNLRVRLGEHLGL 435
            + E + P+AK LSDEER GL++A+G E GD VFF AG+       LG +RV L    GL
Sbjct: 359 ENGELKGPVAKNLSDEERNGLREAVGAEEGDAVFFAAGSRESSQLLLGAVRVELASREGL 418

Query: 436 IDENAFNFLWVTDFPLFEYDEE---------EKRYVACHHPFTSPKDGHMDVMVENPAAA 486
           +D   F F WV DFPLF+  ++           ++ + HHPFT P    +D   ++P  A
Sbjct: 419 LDPKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDKDPEHA 478

Query: 487 RARAYDMVLNGYELGGGSIRNHTAEKQRRMFAALGFSPEEAEAQFGFLTQALEMGAPPHG 546
            + +YD+V NG E+GGGS+R H  + Q R+   LG + EEA+ +FGFL +A + GAPPH 
Sbjct: 479 MSDSYDIVCNGEEMGGGSVRIHRDDIQARVLDVLGITKEEADEKFGFLLEAFKYGAPPHA 538

Query: 547 GIAFGMDRLAMLLTGSSSIRDVIAFPKTQKATCLLTQAPDSVSARQLRDLGLRLRETGKD 606
           G+A G DR   +L G+ SIRDVIAFPK       LT AP  +S  Q         ETG D
Sbjct: 539 GLALGWDRTVSILAGADSIRDVIAFPKAGGGRDPLTGAPAPISDEQ-------RAETGVD 591

Query: 607 GAPNAPQ 613
             P+A +
Sbjct: 592 YDPDADE 598