Pairwise Alignments

Query, 315 a.a., shikimate 5-dehydrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 278 a.a., shikimate 5-dehydrogenase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  132 bits (332), Expect = 9e-36
 Identities = 93/273 (34%), Positives = 135/273 (49%), Gaps = 26/273 (9%)

Query: 13  GIIGHPLGHTMSPLLHNWGFSLLDVPAVYMAWPLEPGRVGDFITAVRTLPIRGASVTIPH 72
           G+IG+P+ H+ SP LH     +  +   Y+   ++   + +   A+  L  +G +VT+P 
Sbjct: 10  GVIGNPITHSRSPHLHRHWLHVYGIEGYYVPLHVQGQDLAEVFHALPKLGFKGVNVTLPF 69

Query: 73  KQAVLPLLDGVSDRARAVGAVNTLYWR-DGQLLGENTDVTGFLAPLRQRAAAGW--RCER 129
           K+  + L D VSDRA  +GA NT+ ++ DG +  +NTD  GF+  LR   A GW  R   
Sbjct: 70  KERAIELADRVSDRAALIGAANTITFQPDGTIHADNTDGYGFIENLR-NGAPGWSPRAAA 128

Query: 130 ALVLGNGGAARAVLAGLRELGPAGDGVVRAVGVTGRNAEKAAPLAAEFG--AEVVDWD-- 185
            +VLG GGAAR VL+ L E G         V +  R   KA  L ++FG    VVDW   
Sbjct: 129 IVVLGAGGAARGVLSALLEAG------APEVRLANRTRAKAEALRSDFGPRVTVVDWHGV 182

Query: 186 ARVHWGADLVVNTTPMGMSGERQGDTAFPEQGFAAQGVAAGGDGRRGLAYDLVYNPLRTR 245
           +     A+ +VNTT +GM+G+       P+       +      R  +  D+VY PL T 
Sbjct: 183 SGTMEDAETLVNTTSLGMTGQ-------PDLELNLDALP-----RSAVVTDIVYRPLMTP 230

Query: 246 FLSEAADAGWDTQDGLGMFVEQGREQFRLWTGL 278
            L +A   G    DGLGM + Q    F  W G+
Sbjct: 231 LLEQAVARGNPVVDGLGMLLFQAAPGFERWFGV 263