Pairwise Alignments

Query, 266 a.a., spermidine/putrescine ABC transporter membrane protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 269 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  167 bits (422), Expect = 3e-46
 Identities = 93/247 (37%), Positives = 144/247 (58%), Gaps = 2/247 (0%)

Query: 15  LRTGLVWLVYAFLYVPILVVIVYSFNDARYTT-EWKGFTLKWYSALAANGPLVDAALNSL 73
           LRT L  L+  FL +P+LV+I  SFN   +     +GF+L+WY    A+   + A  NS+
Sbjct: 12  LRT-LCGLILLFLILPVLVIIPLSFNSGSFLVYPLQGFSLQWYHDFFASAEWMRALKNSI 70

Query: 74  SVATLAATIATVLGTLAAICIRRYRFPGRKVLHGCIYVLTVSPDIVMGISLLIFFIAMGV 133
            VA  A  +A V GTLAAI + R  FPG+ ++   +    V P +++G++  +FF  +G+
Sbjct: 71  IVAPAATLLAMVFGTLAAIGLTRGDFPGKALVMALVISPMVVPVVIIGVASYLFFAPLGM 130

Query: 134 QLGFWTLLAAHVTLALPFVTVTVLARLAEFDEQLIEAARDLGASEWRAFRHVLLPLAAPA 193
              F++L+  H  L +PFV +TV A L  F+  L+ AA  LGAS   AFR V LPL AP 
Sbjct: 131 GNSFFSLIVVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPLIAPG 190

Query: 194 VAAGWLLSFTLSMDDVLVSFFVTGPTFEVLPLRVYSMVRLGVKPDINALSAVMFTVTIVL 253
           V +G L +F  S D+V+V+ F+ GP    LP +++S +R  + P I A + ++   +++L
Sbjct: 191 VISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFSVIL 250

Query: 254 VLLAQTL 260
           +L  + L
Sbjct: 251 LLTLEWL 257