Pairwise Alignments

Query, 266 a.a., spermidine/putrescine ABC transporter membrane protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 294 a.a., Putrescine transport system permease protein PotI (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N1B4

 Score =  187 bits (476), Expect = 2e-52
 Identities = 97/240 (40%), Positives = 153/240 (63%), Gaps = 8/240 (3%)

Query: 25  AFLYVPILVVIVYSFNDARYTTEWKGFTLKWYSALAANGPLVDAALNSLSVATLAATIAT 84
           +F+Y+P+L++++YSFN ++  T W G+++KWY  L  N  L+ + + SL +A   A  A 
Sbjct: 16  SFIYLPMLILVIYSFNASKLVTVWGGWSVKWYVGLLDNTQLMGSVVRSLEIACYTAIAAV 75

Query: 85  VLGTLAAICIRRY-RFPGRKVLHGCIYVLTVSPDIVMGISLLIFFIAMGVQLGF------ 137
            LGTLAA  + R  RF GR +  G +    V P+++ G+SLL+ F+AM   +G+      
Sbjct: 76  ALGTLAAFVLTRVTRFKGRTLFGGLVTAPLVMPEVITGLSLLLLFVAMAQLIGWPQERGL 135

Query: 138 WTLLAAHVTLALPFVTVTVLARLAEFDEQLIEAARDLGASEWRAFRHVLLPLAAPAVAAG 197
            T+  AH T    +V V V ARL E D  + EAA DLGA  ++ F  + +P+ AP++AAG
Sbjct: 136 VTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGARPFKVFFLITIPMIAPSLAAG 195

Query: 198 WLLSFTLSMDDVLVSFFVTGPTFEVLPLRVYSMVRLGVKPDINAL-SAVMFTVTIVLVLL 256
            ++SF LS+DD++++ FV+GP    LP+ V+S VRLGVKP+INA+ S ++  V++V  ++
Sbjct: 196 GMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAVASLILLAVSLVTFMV 255