Pairwise Alignments

Query, 266 a.a., spermidine/putrescine ABC transporter membrane protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 296 a.a., Putrescine transport system permease protein PotI (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N1B4

 Score =  191 bits (484), Expect = 2e-53
 Identities = 98/239 (41%), Positives = 150/239 (62%), Gaps = 8/239 (3%)

Query: 26  FLYVPILVVIVYSFNDARYTTEWKGFTLKWYSALAANGPLVDAALNSLSVATLAATIATV 85
           F+Y P+L++++YSFN ++  T W G+++KWY  L  N  L+ + + SL +A   A  A  
Sbjct: 17  FIYAPMLILVIYSFNASKLVTVWGGWSIKWYVGLMDNTQLMGSVVRSLEIACYTAIAAVA 76

Query: 86  LGTLAAICIRRY-RFPGRKVLHGCIYVLTVSPDIVMGISLLIFFIAMGVQLGF------W 138
           LGTLAA  + R   F GR +  G +    V P+++ G+SLL+ F+AM   +G+       
Sbjct: 77  LGTLAAFVLTRITHFKGRTLFGGLVTAPLVMPEVITGLSLLLLFVAMAQMIGWPQERGIV 136

Query: 139 TLLAAHVTLALPFVTVTVLARLAEFDEQLIEAARDLGASEWRAFRHVLLPLAAPAVAAGW 198
           T+  AH T    +V V V ARL E D  + EAA DLGA  W+ F  + +P+ AP++AAG 
Sbjct: 137 TIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGARPWKVFFLITIPMIAPSLAAGG 196

Query: 199 LLSFTLSMDDVLVSFFVTGPTFEVLPLRVYSMVRLGVKPDINAL-SAVMFTVTIVLVLL 256
           ++SF LS+DD++++ FV+GP    LP+ V+S VRLGVKP+INA+ S ++  V++V  L+
Sbjct: 197 MMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAVASLILLAVSLVTFLV 255