Pairwise Alignments

Query, 266 a.a., spermidine/putrescine ABC transporter membrane protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 282 a.a., Putrescine transport system permease protein PotI (TC 3.A.1.11.2) from Xanthomonas campestris pv. campestris strain 8004

 Score =  207 bits (528), Expect = 2e-58
 Identities = 112/261 (42%), Positives = 167/261 (63%), Gaps = 7/261 (2%)

Query: 13  RTLRTGLVWLVYAFLYVPILVVIVYSFNDARYTTEWKGFTLKWYSALAANGPLVDAALNS 72
           R L   ++ L + FLY+PIL+++VYSFN +R  T W GF+ +WY  L  +  L+DAA  S
Sbjct: 9   RVLGGSVLALGFGFLYLPILLLMVYSFNASRLATVWGGFSTRWYGELLRDRQLLDAAWVS 68

Query: 73  LSVATLAATIATVLGTLAAIC-IRRYRFPGRKVLHGCIYVLTVSPDIVMGISLLIFFIAM 131
           L VA   A  +TVLGT+AA+  +R  RFPG+ +    I    V P++++G+S+L+  ++M
Sbjct: 69  LEVAFWTACASTVLGTMAAMAMVRMRRFPGKTLFGALITAPLVMPEVIIGLSILLLLVSM 128

Query: 132 GVQLGFW-----TLLAAHVTLALPFVTVTVLARLAEFDEQLIEAARDLGASEWRAFRHVL 186
           G  LG        +  AHVT  + FVTV + +RL E D  L EAA DLGA+  + F  + 
Sbjct: 129 GGVLGIAPRGAVAIWVAHVTFTVSFVTVVISSRLQELDRSLEEAAMDLGATPLKVFFLIT 188

Query: 187 LPLAAPAVAAGWLLSFTLSMDDVLVSFFVTGPTFEVLPLRVYSMVRLGVKPDINALSAVM 246
           LP+ APA+A+GWLL+FTLS+DDV+++ F+ GP+   LP++V+S VR G+ P INAL+ VM
Sbjct: 189 LPIIAPALASGWLLAFTLSLDDVVIASFLAGPSSTTLPIKVFSSVRQGISPKINALATVM 248

Query: 247 -FTVTIVLVLLAQTLTRTRRK 266
              V++  V+    L R+ ++
Sbjct: 249 VLAVSVAAVIGWWLLARSEKR 269