Pairwise Alignments

Query, 529 a.a., Nitrite reductase (cytochrome; ammonia-forming) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 466 a.a., cytochrome c nitrite reductase (RefSeq) from Shewanella loihica PV-4

 Score =  210 bits (534), Expect = 1e-58
 Identities = 142/424 (33%), Positives = 206/424 (48%), Gaps = 64/424 (15%)

Query: 52  ETRSSAFKAEFPQQYASYQRNDESTVMTEFNGSVPFNKNDNVNPLPEGYKHAQPYLKNLW 111
           E R+  +K +F +QY S+    ES  + +    VP                    L  LW
Sbjct: 32  EPRNEVYKDKFSKQYNSWHDTAESKEVVDMLEEVPS-------------------LVVLW 72

Query: 112 LGYPFSYEYRNARGHTKALEDFLHIDRINT--YAEKGGLPATCWNCKTPKMMGWVKQYGD 169
            GY F+ +Y   RGH  A+ D  +  R      AE G +P  CW+CK+P +   +++ G+
Sbjct: 73  AGYGFAKDYNAPRGHMYAVTDVRNTLRTGAPKSAEDGPMPMACWSCKSPDVPRVIEEQGE 132

Query: 170 DF-----WAKDINEFRDKIDMKDETIGCANCHDPQTMELRLYSEPLKDQLKAQ-GKDWDK 223
           D      W K   E  +       TIGC++CH+  + +LR+ S P  ++  A  G  +DK
Sbjct: 133 DGYFTGKWYKGGAEIVN-------TIGCSDCHEKGSSKLRM-SRPFAERAMATLGTPFDK 184

Query: 224 LSRNDKRSLVCGQCHVEYYFQDKE--KGVAKKPVFPWADGYDPQQMYTYYKTAGNSQMKG 281
            S+ DK+S+VCGQCHVEYYF+  +  KG  K   FPW  G   +QM  YY          
Sbjct: 185 ASKKDKQSMVCGQCHVEYYFEKTKDRKGFVK---FPWDMGTTVEQMEVYYDNM------- 234

Query: 282 FEGNFVDWVHPVSKTPMIKAQHPEYEMWQNGVHGAAGVSCADCHMGYTRTDDKKKISGHW 341
               F DW H VSKTPM+KAQHP YE WQ GVHG   V+C DCHM   +  + +K + H 
Sbjct: 235 ---EFKDWTHAVSKTPMLKAQHPGYETWQLGVHGKNNVTCTDCHMPKVKNAEGRKFTDHK 291

Query: 342 WTSPLKDPDMRACRQCHSDKSPDYLRSRVLFSQQKTFDQLLKAQDLSVKAHEAVRLASEF 401
             +P  D     C  CH+ +S +++ +     + K  D   +A+   VKAH   + A + 
Sbjct: 292 VGNPF-DRFEETCATCHT-QSKEFMVNLTKERKVKVADLKARAESQLVKAHFEAKAAWD- 348

Query: 402 QGAKPANYEELMIQARDMVRKGQFFWDYVSAENSVGFHNPAKALDTLASSQQYSQQAVDL 461
            GA  A  + +++     +R  Q+ WDY +A + V  H   +AL  L +       AVD 
Sbjct: 349 AGATEAEMKPILMD----IRHAQWRWDYATASHGVAAHAADEALRILGT-------AVDK 397

Query: 462 ASEA 465
           A +A
Sbjct: 398 AGDA 401