Pairwise Alignments

Query, 529 a.a., Nitrite reductase (cytochrome; ammonia-forming) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 452 a.a., nitrite reductase (cytochrome; ammonia-forming) (RefSeq) from Shewanella loihica PV-4

 Score =  175 bits (443), Expect = 4e-48
 Identities = 118/416 (28%), Positives = 188/416 (45%), Gaps = 49/416 (11%)

Query: 50  AEETRSSAFKAEFPQQYASYQRNDESTVMTEFNGSVPFNKNDNVNPLPEGYKHAQPYLKN 109
           A +      KA++P QYAS+Q        ++   S P                       
Sbjct: 22  AADVSPEKMKAKYPNQYASWQATSTQAARSDMLASYPA-------------------AII 62

Query: 110 LWLGYPFSYEYRNARGHTKALEDFLHIDRINTYAEKG--GLPATCWNCKTPKMMGWVKQY 167
           LW G  ++ EY + RGH  A+ D  H  R      +G  GL A+CW CK+P +   + + 
Sbjct: 63  LWAGSAYAKEYHSPRGHQFAVADVTHTLRTGVPPGEGKKGLSASCWTCKSPDVPRLIDEL 122

Query: 168 G-DDFWAKDINEFRDKIDMKDETIGCANCHDPQTMELRLYSEPLKDQLKAQGKDWDKLSR 226
           G + F AK+  +   +++     + C++CH+    EL L     +D +      +DK   
Sbjct: 123 GVEGFSAKNFTDLGTEMN---SVVYCSDCHEQGKAELSLPRPHARDAMAKVHLPFDKQDE 179

Query: 227 NDKRSLVCGQCHVEYYFQDKEKGVAKKPVFPWADGYDPQQMYTYYKTAGNSQMKGFEGNF 286
             + + VCGQCHV YYFQ +    + K   PW  G     +  YY T            F
Sbjct: 180 AMQGAQVCGQCHVTYYFQPER---SNKVNIPWIFGSSADLIEKYYDTR----------RF 226

Query: 287 VDWVHPVSKTPMIKAQHPEYEMWQNGVHGAAGVSCADCHMGYTRTDDKKKISGHWWTSPL 346
            +W+HPVSKTP++KA+HPE+E W    H   GV+C  CHM      + K  + H     L
Sbjct: 227 YEWIHPVSKTPILKARHPEFEHWSRSEHAKVGVTCVTCHMPAATDGEGKAYTNHQVGKAL 286

Query: 347 KDPDMRACRQCHSDKSPDYLRSRVLFSQQKTFDQLLKAQDLSVKAHEAVRLASEFQGAKP 406
            + D+  C+ CH +K    L  ++  ++ +  ++  + + L VKAH     A +  GA  
Sbjct: 287 PNYDV-VCQGCHENKQA--LMKQLNSAKSQIAEKARRVEQLLVKAHYEAGAAWD-AGASW 342

Query: 407 ANYEELMIQARDMVRKGQFFWDYVSAENSVGFHNPAKA---LDTLASSQQYSQQAV 459
           A    +M  A   +R  Q+ WD+  + +    HNP +A   LDT     +++++A+
Sbjct: 343 A----IMNDAIMAIRHAQWRWDFAMSSHGSYAHNPQEANALLDTAILQAEHARRAL 394