Pairwise Alignments

Query, 405 a.a., Extracellular ligand-binding receptor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 393 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  248 bits (632), Expect = 3e-70
 Identities = 143/392 (36%), Positives = 218/392 (55%), Gaps = 16/392 (4%)

Query: 17  ALAVPALLLGAGLPAATAQAADPVKIGAFFALSGPTAPVGTPTKLVAQMFVDKVNKEGGI 76
           A+   AL L +     +A A   +K+G+  +++GP + +G P     +M+VDK+N  GG+
Sbjct: 12  AVGATALALSSFSLMHSALAQSTIKLGSVLSITGPASFLGDPEDKTLKMYVDKINAAGGV 71

Query: 77  NGRPIELVLGDTEGDPTKAVLTFKRFVSEEKVVAVIGPTRTDEGMAVKRQIESSGIPTVM 136
           +G+ IELV+ D  GD  KA     R V ++KVVA+IG + T   MA+    E + IP + 
Sbjct: 72  DGKKIELVVYDDGGDANKARTFATRLVEDDKVVAMIGGSTTGTTMAMIPVFEEAQIPFIS 131

Query: 137 TVGGDPVIMEGKLGNMDFGTARSVFKSPQRSSTAVRKVLGYLKKHELTKVALLLSGDNFG 196
             G   +I             + VFK+P     A  K+   +K  + TKVA++   D FG
Sbjct: 132 FAGAVEIIDP---------VRKYVFKTPHTDKMACEKIFENIKARKFTKVAMISGTDGFG 182

Query: 197 QDGERWLRSLAPEYGIEIVGTEQFKPTDVDMKTQLTAL-AGKGPQAVICWTIGPAGALVS 255
                    +AP YG+ IV  E + P D DM  QLT + A  G +AV+    G   A+V+
Sbjct: 183 SSMRAECLKVAPNYGVSIVAEETYGPRDSDMTAQLTKIKAAPGVEAVVNPGFGQGPAIVT 242

Query: 256 KNHHALGL-TMPLLQCHGLPDPAYIKLAGEASEGDLMPATKLMTWEALPDGDPQKKVIAE 314
           +N+  LG+ + P  Q HG+   ++I+LAG A+EG  +PA  L+  + LPD DPQKKV+ E
Sbjct: 243 RNYAQLGMSSTPFYQSHGVASKSFIELAGPAAEGVRLPAAALLVADKLPDNDPQKKVVTE 302

Query: 315 FVRLYRDEYKYDAQYPLNTHSGYAWDALLLLVEAMRKV-GTEPARVRDALEATRGLVGVS 373
           +   Y D  K     P++T  G+A+D L +LV+AM++   T+P +VRD +EAT+G VG  
Sbjct: 303 YKATYEDTTK----QPVSTFGGHAYDGLYILVDAMKRAKSTDPKKVRDEIEATKGFVGTG 358

Query: 374 GVFTLGPQDHNGLGEDSMVMLQVRGGRFVMVE 405
           G+ T+ P DH GL   +  ML+V+ G + +V+
Sbjct: 359 GIVTMSPTDHLGLDLSAFRMLEVKNGDWTLVQ 390