Pairwise Alignments

Query, 405 a.a., Extracellular ligand-binding receptor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 385 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score =  128 bits (322), Expect = 2e-34
 Identities = 103/396 (26%), Positives = 176/396 (44%), Gaps = 21/396 (5%)

Query: 15  VAALAVPALLLGAGLPAATAQAADPVKIGAFFALSGPTAPVGTPTKLVAQMFVDKVNKEG 74
           ++A A+   L   GL  A     + + IG     +GP A +G P +   +     V KE 
Sbjct: 6   LSATAIAVALALPGLSGAALAETNEITIGITVTTTGPAAALGIPERNALEF----VAKE- 60

Query: 75  GINGRPIELVLGDTEGDPTKAVLTFKRFVSEEKVVAVIGPTRTDEGMAVKRQIESSGIPT 134
            I G P+++++ D  GDPT A    +RFV+E K   ++G + T   +AV      + +P 
Sbjct: 61  -IGGHPLKVIVLDDGGDPTAATTNARRFVTESKADVIMGSSVTPPTVAVSNVANEAQVPH 119

Query: 135 VMTVGGDPVIMEGKLGNMDFGTARSVFKSPQRSSTAVRKVLGYLKKHELTKVALLLSGDN 194
           +  +   P+  E          A+     PQ      + +  ++KK+ +  V  +   D+
Sbjct: 120 I-ALAPLPITPE---------RAKWSVAMPQPIPIMGKVLYEHMKKNNIKTVGYIGYSDS 169

Query: 195 FGQDGERWLRSLAPEYGIEIVGTEQFKPTDVDMKTQLTALAGKGPQAVICWTIGPAGALV 254
           +G      L+      G++IV  E+F   D  +  Q+  L    P A++    G A AL 
Sbjct: 170 YGDLWFNDLKKQGEAMGLKIVAEERFARPDTSVAGQVLKLVAANPDAILVGASGTAAALP 229

Query: 255 SKNHHALGLTMPLLQCHGLPDPAYIKLAGEASEGDLMPATKLMTWEALPDGDPQKKVIAE 314
             +    G    + Q HG     +I++AG+++EG LM +  +M  E   D    KK   E
Sbjct: 230 QTSLRERGYKGLIYQTHGAASMDFIRIAGKSAEGVLMASGPVMDPEGQDDSALTKKPGLE 289

Query: 315 FVRLYRDEYKYDAQYPLNTHSGYAWDALLLLVEAMRKV---GTEPAR--VRDALEATRGL 369
               Y  +Y  +++     HS  A+  L  +V    K    GT+  R  +R AL + + +
Sbjct: 290 LNTAYEAKYGPNSRSQFAAHSFDAFKVLERVVPVALKTAKPGTQEFREAIRKALVSEKDI 349

Query: 370 VGVSGVFTLGPQDHNGLGEDSMVMLQVRGGRFVMVE 405
               GV++    D  GL + S ++L V+ G++VMV+
Sbjct: 350 AASQGVYSFTETDRYGLDDRSRILLTVKDGKYVMVK 385