Pairwise Alignments

Query, 353 a.a., chorismate synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 367 a.a., Chorismate synthase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  342 bits (876), Expect = 1e-98
 Identities = 184/358 (51%), Positives = 230/358 (64%), Gaps = 11/358 (3%)

Query: 1   MSGNTFGRIFRLTTYGESHGPGLGGVVDGCPAGVPLDESVIQRELDLRRPGSASAGLAGT 60
           MS NTFG +FR+TT+GESHGP LG  VDGCP GVP+ E  +Q  LD R+PG        T
Sbjct: 1   MSFNTFGHLFRVTTWGESHGPALGATVDGCPPGVPITEEALQVWLDKRKPGQNKFT---T 57

Query: 61  ARKEPDTVRLLSGVFEGVTTGTPIGFHIANEDQRSRDYGDLAKLYRPGHADITYDAKYGL 120
            R+EPD V +LSGVFEG +TG+PI   I N DQRS+DYGD+A+ +RPGHADITY  KYG+
Sbjct: 58  QRREPDAVEILSGVFEGQSTGSPIQLMIRNADQRSKDYGDIAEKFRPGHADITYWQKYGI 117

Query: 121 RDFRGGGRASGRETVSRVAGGAVALALLA--MHDIEVRAYTVEIG--GVPADVVDPAGAQ 176
           RD+RGGGR+S RET +RVA G VA A L   + D+ +  Y  ++G  G+     D     
Sbjct: 118 RDYRGGGRSSARETAARVAAGGVARAALGALVPDLRITGYMTQMGPHGIDRARFDWEQID 177

Query: 177 GRLFFSPDPDVVPAWESLVHDVRAEGDTLGGIVQVEATGVPAGLGEPVFDKLDALLAHAM 236
              F++PD      W + +  +R  G ++G +++V A GVP GLG P++ KLD  LA AM
Sbjct: 178 QNPFWTPDAAAAEDWAAYLDGLRKAGSSVGAVIEVTARGVPVGLGAPIYAKLDTDLAAAM 237

Query: 237 MSVGAVKAVEVGAGLEAARLRGSENNDPIIPGG----FHTNHAGGILGGISNGQPIVVRA 292
           MS+ AVKAVE+G G+ AA L G  N D I  GG    + +NHAGGILGGIS GQ +VVR 
Sbjct: 238 MSINAVKAVEIGEGMAAASLTGEANADEIFMGGDGPEYSSNHAGGILGGISTGQDVVVRF 297

Query: 293 TVKPIPSIAQEQITIDTNGRPAPLRVGGRHDICAIPRVVPVLKAMAALVLADSLLLQR 350
            VKP  SI   + TI  +G PA +   GRHD C   R VPV +AM A VL D LLL R
Sbjct: 298 AVKPTSSILTTRQTITKSGAPAEIITKGRHDPCVGIRAVPVAEAMMACVLLDHLLLHR 355