Pairwise Alignments

Query, 353 a.a., chorismate synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 372 a.a., chorismate synthase from Caulobacter crescentus NA1000

 Score =  338 bits (866), Expect = 2e-97
 Identities = 189/363 (52%), Positives = 235/363 (64%), Gaps = 18/363 (4%)

Query: 1   MSGNTFGRIFRLTTYGESHGPGLGGVVDGCPAGVPLDESVIQRELDLRRPGSASAGLAGT 60
           MS NTFG +FR+TT+GESHGP LG VVDGCP G+ L   +IQ  LD RRPG+   G   T
Sbjct: 1   MSHNTFGHLFRVTTWGESHGPALGCVVDGCPPGIALTAEMIQVFLDKRRPGN---GKFVT 57

Query: 61  ARKEPDTVRLLSGVFEGV------TTGTPIGFHIANEDQRSRDYGDLAKLYRPGHADITY 114
            R+EPD VR+LSGVFE        TTGTPI   I N DQRS+DY ++A+ +RPGHAD  Y
Sbjct: 58  QRQEPDAVRILSGVFEDARSNGQRTTGTPISLMIENTDQRSKDYSEIAQAFRPGHADYAY 117

Query: 115 DAKYGLRDFRGGGRASGRETVSRVAGGAVALALLAMHDIEVRAYTVEIGGVPADVV--DP 172
            AKYG+RD+RGGGR+S RET +RVA GAV  A L +  + VRA  V+IG    D    D 
Sbjct: 118 FAKYGVRDYRGGGRSSARETAARVAAGAV--ARLIIPGVTVRAALVQIGPHKIDRSNWDW 175

Query: 173 AGAQGRLFFSPDPDVVPAWESLVHDVRAEGDTLGGIVQVEATGVPAGLGEPVFDKLDALL 232
           A  +   ++SPD  +VP WE  +  +R  G + G +V+VEATGVPAG G P++ KLDA L
Sbjct: 176 AQTEQNPYWSPDAAIVPVWEEHLEKIRKAGSSTGAVVEVEATGVPAGWGAPLYAKLDAEL 235

Query: 233 AHAMMSVGAVKAVEVGAGLEAARLRGSENNDPIIPGG-----FHTNHAGGILGGISNGQP 287
           A A+MS+ A K VE+G G ++A L G +N D +  G      F +NHAGGILGGIS+GQP
Sbjct: 236 AAALMSINAAKGVEIGDGFDSAALTGEDNADTMRMGDDGQPVFQSNHAGGILGGISSGQP 295

Query: 288 IVVRATVKPIPSIAQEQITIDTNGRPAPLRVGGRHDICAIPRVVPVLKAMAALVLADSLL 347
           IV R   KP  SI   + T++  G    LR  GRHD C   R VPV++AM A VLAD+ L
Sbjct: 296 IVARVAFKPTSSILIPRETVNEAGEEIELRTKGRHDPCVGIRGVPVVEAMTACVLADAFL 355

Query: 348 LQR 350
             R
Sbjct: 356 RHR 358