Pairwise Alignments

Query, 479 a.a., RNA methyltransferase, TrmA family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 376 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase from Klebsiella michiganensis M5al

 Score =  154 bits (389), Expect = 5e-42
 Identities = 120/410 (29%), Positives = 186/410 (45%), Gaps = 39/410 (9%)

Query: 70  VQCAPFCAHFGDCGGCAWQDLPYAEQLRWKERFVVDALGRIGGLRDANVLPILASPA--- 126
           + CA + A  G C  C W +LP ++QL        D +  +  L     +    +PA   
Sbjct: 1   MHCALYDA--GRCRSCQWLELPISQQL-------ADKMADLRALLADAPVAEWCAPACGP 51

Query: 127 ERGFRNKMEFAFSQDRDGQLHLGLRRRASRAVVDITECHLQTPLTVRIVEAVRELARESG 186
           E GFRNK +   S   +  L LG+  R   A  D+T+C L       +  A++     +G
Sbjct: 52  ESGFRNKAKMVVSGSVERPL-LGMLHR-DGAPEDLTDCPLYPQSFAPVFAALKPFIARAG 109

Query: 187 LPGWDDSRQDGFWRFLVVREPELGRDAGADTPAEGEGQDTPGRQCLIQCITGRHPGAAQA 246
           L  +  +R+ G  +++++ E  L            E + T  R  L              
Sbjct: 110 LTPYHVARRRGELKYILLTESRLDGGMMLRFVLRSETRLTQLRAAL-------------- 155

Query: 247 VSRLAEALRARFPEVTGVVHSLRLDPEQIAYGERVLAVDGEAVLTERLGGNDLLLGPDSF 306
                 AL+A  P++  +  +++     I  G + + +  +  L E   G  L + P SF
Sbjct: 156 -----PALQALLPQLKVITANIQPVHMAIMEGPQEIFLTDQQALAENFNGVPLWIRPQSF 210

Query: 307 FQTNTAAAGLLYDEARRMAAAGPDDTVWDLYSGVGAIALHLARAAGAVRGFEITPEAVND 366
           FQTN   A  LY  AR      P + +WDL+ GVG   LH A     + G EI PEA+  
Sbjct: 211 FQTNPTVASRLYATARDWVRQLPVNHMWDLFCGVGGFGLHCASPEMRLTGIEIAPEAIAC 270

Query: 367 ARANAARNNILNCSFVSGDVRASLRRERPGEGVSPRIVVVDPPRAGLHEDVVEAVSAHQP 426
           A+ +AA   + N  F + D      +   GEG  P +V+V+PPR G+ +++   +S   P
Sbjct: 271 AKQSAAELGLHNLHFQALD----STQFATGEGEIPDLVLVNPPRRGIGDELCAYLSRMAP 326

Query: 427 ERIVYVSCNPATMARDAALFTARGYALQEARPVDLFPHSPHVECVALLTR 476
           E I+Y SCN  TMA+D A  +  GY ++  +  D+FPH+ H E + LL R
Sbjct: 327 EFIIYSSCNARTMAKDIARLS--GYRIERVQLFDMFPHTAHYEVLTLLVR 374