Pairwise Alignments

Query, 479 a.a., RNA methyltransferase, TrmA family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 454 a.a., RNA methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  268 bits (686), Expect = 2e-76
 Identities = 171/471 (36%), Positives = 247/471 (52%), Gaps = 35/471 (7%)

Query: 19  LAAGGRAVCRHEGRVVFVAGGLPGQRVRARLTTVKRRFAEATLDAVLEPSPVQCAPFCAH 78
           +AA G+A+ +    V+FV   +PG  V  ++   K ++AEA      E SPV+  PFC H
Sbjct: 1   MAAEGKAIAKVNDLVIFVPYVVPGDVVDLQIKRKKNKYAEAEAVKFHELSPVRAVPFCQH 60

Query: 79  FGDCGGCAWQDLPYAEQLRWKERFVVDALGRIGGLRDANVLPILASPAERGFRNKMEFAF 138
           +G CGGC WQ LPY+EQ+R+K++ V D L RIG +    + PIL S     +RNK+EF F
Sbjct: 61  YGVCGGCKWQVLPYSEQIRYKQKQVEDNLRRIGKIELPEISPILGSAKTEFYRNKLEFTF 120

Query: 139 SQDR-------------DGQLHLGLR-RRASRAVVDITECHLQTPLTVRIVEAVRELARE 184
           S  R             D    +G     A   V+ I +C LQ  ++ RI  AVR+ A E
Sbjct: 121 SNKRWLTNDEVRQDVKYDQMNAVGFHIPGAFDKVLAIEKCWLQDDISNRIRNAVRDYAYE 180

Query: 185 SGLPGWDDSRQDGFWRFLVVREPELGRDAGADTPAEGEGQDTPGRQCLIQC-ITGRHPGA 243
                 +   Q+G  R L++R           T + GE         ++ C IT  H   
Sbjct: 181 HDYSFINLRTQEGMLRNLIIR-----------TSSTGE------LMVIVICKITEDHE-- 221

Query: 244 AQAVSRLAEALRARFPEVTGVVHSLRLDPEQIAYGERVLAVDGEAVLTERLGGNDLLLGP 303
            +   +L + +   FPE+T +++ +            V    G+  + E + G    +GP
Sbjct: 222 MELFKQLLQFIADSFPEITSLLYIINNKCNDTINDLDVHVFKGKDHMFEEMEGLRFKVGP 281

Query: 304 DSFFQTNTAAAGLLYDEARRMAAAGPDDTVWDLYSGVGAIALHLARAAGAVRGFEITPEA 363
            SF+QTN+  A  LY  AR  A     + V+DLY+G G IA  ++R A  V G E  PEA
Sbjct: 282 KSFYQTNSEQAYNLYKIAREFAGLTGKELVYDLYTGTGTIANFVSRQARQVIGIEYVPEA 341

Query: 364 VNDARANAARNNILNCSFVSGDVRASLRRERPGEGVSPRIVVVDPPRAGLHEDVVEAVSA 423
           + DA+ NA  N I N  F +GD++  L +E   +   P +++ DPPRAG+H+DVV+ +  
Sbjct: 342 IEDAKVNAEINEIKNALFYAGDMKDMLTQEFINQHGRPDVIITDPPRAGMHQDVVDVILF 401

Query: 424 HQPERIVYVSCNPATMARDAALFTARGYALQEARPVDLFPHSPHVECVALL 474
            +P+RIVYVSCNPAT ARD  L   + Y ++  +PVD+FPH+ HVE V LL
Sbjct: 402 AEPKRIVYVSCNPATQARDLQLLDGK-YKVKAVQPVDMFPHTHHVENVVLL 451