Pairwise Alignments

Query, 452 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 448 a.a., Two-component response regulator AlgB from Pseudomonas syringae pv. syringae B728a

 Score =  315 bits (806), Expect = 2e-90
 Identities = 185/448 (41%), Positives = 261/448 (58%), Gaps = 13/448 (2%)

Query: 6   VLLVEDELSMLLGMQHALSQAGYEVATAGDAEKAQQLLRQRPFDLVITDLRLPGMNGMEL 65
           +LLV+DE ++L   ++ L   GY VATA  A +A  L++++ FDL   DLRL   NG+++
Sbjct: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQADTLMQRQVFDLCFLDLRLGEDNGLDV 70

Query: 66  LEGICELYPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFPRDGLLIAVERYFRFLDLK 125
           L  +    P   V+++TA   V+ AV AI+AGA D+L KP   D L +A  +      L 
Sbjct: 71  LAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130

Query: 126 RENARLRGE--RDDGEFIGESPMMLKVFERIRAIAGSCVPVLVLGPSGSGKELVAGALHR 183
                L GE  +        SP M+ + E  R +A +   +L+LG SG+GK  +A A+H 
Sbjct: 131 ARLEALEGEVRKPKDGLDSHSPSMMAILETARQVAVTDANILILGESGTGKGELARAIHG 190

Query: 184 LSKRRDKPFIKINCAALPEHLLESELFGHEKGAFTGAQQARKGKFEAADGGTLFFDEAGE 243
            SKR  K  + INC +L   L+ESELFGH +GAFTGA ++  G+   ADGGTLF DE G+
Sbjct: 191 WSKRAKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADGGTLFLDEIGD 250

Query: 244 MPLAVQAKLLRVLEDQEVTPVGGNMPRKVDVRTVFATARDLEEAIGAGTFREDLYYRINV 303
            PL +Q KLLR ++D+E   VG  + R+ DVR + AT  +LE+ + +G FREDL YR+NV
Sbjct: 251 FPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRSGRFREDLLYRLNV 310

Query: 304 VPVTLPPLRERGGDVALLAERFLRRFCAQHDRQVT-FSEQARNALLAYDYPGNVRELRNA 362
           + + LP LRER  D+  LA+RFL RF  ++ R    FSE+AR ALL Y +PGN+RELRN 
Sbjct: 311 ITLNLPALRERSEDILTLADRFLARFVKEYARPARGFSEEARAALLNYRWPGNIRELRNV 370

Query: 363 IERAVILCAEDKIHVGHLPKRIRDATQASQEQQPEETRFVQLADGVAQFEKKRILEALQK 422
           IERA I+C ++++ V HL            EQ       V  A  + + EK  I  A+  
Sbjct: 371 IERASIICPQERVEVSHL---------GMAEQPTNNAPRVGAALSLDELEKAHI-GAVLA 420

Query: 423 TGGRRIRAAELLGITRKQLWLKLKELDI 450
           T     +AA+ LGI    L+ K K+ ++
Sbjct: 421 TSETLDQAAKTLGIDASTLYRKRKQYNL 448