Pairwise Alignments

Query, 452 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 462 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

 Score =  321 bits (822), Expect = 4e-92
 Identities = 181/464 (39%), Positives = 280/464 (60%), Gaps = 15/464 (3%)

Query: 1   MTKHSVLLVEDELSMLLGMQHALSQAGYEVATAGDAEKAQQLLRQRPFDLVITDLRLPGM 60
           MTK++ L+V+DE  +   ++  L++ G    TA D   AQ+LL Q    L +TD+ LP  
Sbjct: 1   MTKYTALIVDDEPDIRELLEITLTRMGITTLTAPDLTSAQKLLEQNTTHLCLTDMNLPDG 60

Query: 61  NGMELLEGICELYPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFPRDGLLIAVERYFR 120
           NG+EL++ I +  P T V +ITA+  ++ A++++KAGAFDF+ KP     L   V    +
Sbjct: 61  NGIELVQWIQKHSPATPVAVITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALK 120

Query: 121 FLDLKRENARLRGERDDGEFIGESPMMLKVFERIRAIAGSCVPVLVLGPSGSGKELVAGA 180
             + K +      E   G  +G+SP + K+  + R +A S  PV + G SGSGKELVA  
Sbjct: 121 LAEPKADAEDTADE--PGLLLGKSPEIRKLRNQTRKLARSQAPVFISGESGSGKELVARM 178

Query: 181 LHRLSKRRDKPFIKINCAALPEHLLESELFGHEKGAFTGAQQARKGKFEAADGGTLFFDE 240
           +H    RR+ PFI +NC A+P  L+ESE FGH+KG+FTGA + + G F +A+GGTLF DE
Sbjct: 179 IHLQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDE 238

Query: 241 AGEMPLAVQAKLLRVLEDQEVTPVGGNMPRKVDVRTVFATARDLEEAIGAGTFREDLYYR 300
             ++PLA+Q KLLR ++++ V PVG      VD+R + AT ++L E +  G+FR+DL+YR
Sbjct: 239 VADLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYR 298

Query: 301 INVVPVTLPPLRERGGDVALLAERFLRRFCAQHD-RQVTFSEQARNALLAYDYPGNVREL 359
           INV+ +++PPLRER  D++LL+   L R   +++    + +  A + L +YD+PGNVREL
Sbjct: 299 INVIELSVPPLRERPDDISLLSNHILERIAKEYECDPASLTPAAVDRLRSYDFPGNVREL 358

Query: 360 RNAIERAVILCAEDKI-----HVGHLPKRIRDATQASQEQQPEETRFVQLADG------- 407
            N +ERA  LC  D+I     H+G+  +    A+Q   E Q  +   + + DG       
Sbjct: 359 ENVLERAFTLCDADQIDADDLHLGNGVQHAASASQIIAEGQVGDGEGIAVPDGEIDLEGY 418

Query: 408 VAQFEKKRILEALQKTGGRRIRAAELLGITRKQLWLKLKELDIK 451
           + + E++ I +AL+ T   +  AA+ LGI+ + L  +LK+L ++
Sbjct: 419 LEKIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME 462