Pairwise Alignments

Query, 452 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 475 a.a., two-component response regulator NtrC from Marinobacter adhaerens HP15

 Score =  318 bits (814), Expect = 3e-91
 Identities = 187/460 (40%), Positives = 270/460 (58%), Gaps = 16/460 (3%)

Query: 5   SVLLVEDELSMLLGMQHALSQAGYEVATAGDAEKAQQLLRQRPFDLVITDLRLPGMNGME 64
           +V +++D+ S+   ++ AL+QAG +       E     L     D +++D+R+PG++G+ 
Sbjct: 6   NVWIIDDDRSIRWVLERALNQAGMQPRVFDSGESIMMRLEHEQPDAIVSDIRMPGVDGIT 65

Query: 65  LLEGICELYPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFPRDGLLIAVERYFRFLDL 124
           LL  I +++P   VI++TA  ++E AV + + GAF++L KPF  D  +  V+R       
Sbjct: 66  LLSQIVDVHPDVPVIIMTAHSDLESAVTSYQTGAFEYLPKPFDVDDAVALVKRAVAHSHE 125

Query: 125 KRENARLRGE--RDDGEFIGESPMMLKVFERIRAIAGSCVPVLVLGPSGSGKELVAGALH 182
           KR +   + E  + + E IGE+P M +VF  I  ++ S + VL+ G SG+GKELVA ALH
Sbjct: 126 KRASGEPQAEMAQRNAEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAQALH 185

Query: 183 RLSKRRDKPFIKINCAALPEHLLESELFGHEKGAFTGAQQARKGKFEAADGGTLFFDEAG 242
             S R + PFI +N AA+P+ L+ESELFGHEKGAFTGA  AR+G+FE A+GGTLF DE G
Sbjct: 186 NHSPRANHPFIALNMAAIPKDLIESELFGHEKGAFTGAGAARQGRFEQANGGTLFLDEIG 245

Query: 243 EMPLAVQAKLLRVLEDQEVTPVGGNMPRKVDVRTVFATARDLEEAIGAGTFREDLYYRIN 302
           +MP   Q +LLRVL D E   VGG  P KVDVR + AT +DLE+ + AGTFREDL++R+N
Sbjct: 246 DMPADTQTRLLRVLADGEFYRVGGTTPIKVDVRIIAATHQDLEKLVQAGTFREDLFHRLN 305

Query: 303 VVPVTLPPLRERGGDVALLAERFLRRFCAQ-HDRQVTFSEQARNALLAYDYPGNVRELRN 361
           V+ V LP L ER  D+  L + FL+R   +         E+A   L    +PGNVR+L N
Sbjct: 306 VIRVHLPKLAERREDIPRLMQHFLKRAAKELAVEPKILREEAEEYLTTLPWPGNVRQLEN 365

Query: 362 AIERAVILCAEDKIHVGHLPKRI-------------RDATQASQEQQPEETRFVQLADGV 408
                 ++ +  +IH+  LP  +             ++  +   EQ+ +  +   L   V
Sbjct: 366 TCRWLTVMASGREIHIDDLPPELLHQAETPTTGTTWQEGLKNWAEQELKRGKKGILDTAV 425

Query: 409 AQFEKKRILEALQKTGGRRIRAAELLGITRKQLWLKLKEL 448
            +FEK  I  AL+ TGGRR  A+ LLG  R  L  K+ EL
Sbjct: 426 PEFEKIMIETALKHTGGRRRDASILLGWGRNTLTRKINEL 465