Pairwise Alignments

Query, 452 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 467 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

 Score =  316 bits (810), Expect = 9e-91
 Identities = 201/469 (42%), Positives = 270/469 (57%), Gaps = 37/469 (7%)

Query: 6   VLLVEDELSMLLGMQHALSQAGYEVATAGDAEKAQQLLRQRPFDLVITDLRLPGMNGMEL 65
           +L+VEDE  +   ++  L  AGYEVA A   E+A+Q      FDL+I+DLRLPG  G EL
Sbjct: 4   ILIVEDEDIIRSAVRKLLLHAGYEVADAASVEEAEQNHEPDQFDLIISDLRLPGAAGTEL 63

Query: 66  LEGICELYPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFPRDGLLIAVERYFRFLDLK 125
           +       P T V+++T++  +  AV ++K GA +++ KPF  D +L AVE         
Sbjct: 64  INRA----PNTPVLIMTSYASLRSAVDSMKMGAVEYIAKPFDHDEMLAAVENILARKPAG 119

Query: 126 REN------ARLRGERDDGEFI--GESPMMLKVFERIRAIAGSCVPVLVLGPSGSGKELV 177
           R +      A    E  D   I  G+   M +VF  IR +A +   VL+ G SG+GKEL 
Sbjct: 120 RNSGDDSAPALETPESSDPANIMFGQCEPMQRVFTLIRKVAPTETTVLIQGESGTGKELA 179

Query: 178 AGALHRLSKRRDKPFIKINCAALPEHLLESELFGHEKGAFTGAQQARKGKFEAADGGTLF 237
           A ALH LS R  KP I +NCAA+PE L+ESELFGHEKGAFTGA  AR G  EAADGG+LF
Sbjct: 180 ARALHLLSPRAAKPLISVNCAAIPESLIESELFGHEKGAFTGAVSARTGLIEAADGGSLF 239

Query: 238 FDEAGEMPLAVQAKLLRVLEDQEVTPVGGNMPRKVDVRTVFATARDLEEAIGAGTFREDL 297
            DE GE+P   QA+LLRVL++ E+  VG    R V+VR + AT R+L+     G FREDL
Sbjct: 240 LDEIGELPAEAQARLLRVLQESEIRKVGSTQSRTVNVRMIAATHRNLKAMTRTGEFREDL 299

Query: 298 YYRINVVPVTLPPLRERGGDVALLAERFLRRFCAQHDR----QVTFSEQARNALLAYDYP 353
           YYR+NV+ + +PPLRER  D+  LA RFL+R   Q +R     +  S +A  AL  + +P
Sbjct: 300 YYRLNVMQIRIPPLRERQSDILGLARRFLKR---QGERMGKPDLNLSPEAMRALERHRWP 356

Query: 354 GNVRELRNAIERAVILCAEDKIHVGHLPKRIRDATQASQEQQPE----------ETRFVQ 403
           GNVREL NAIERA ILC  D I     P  +   ++ S E  PE           TR V 
Sbjct: 357 GNVRELENAIERATILCDGDVI----TPSLLDLDSEGSDEYIPETLVDGNNEQTHTREVD 412

Query: 404 LADGVA--QFEKKRILEALQKTGGRRIRAAELLGITRKQLWLKLKELDI 450
            ++ ++   + +  +LE   +     +  A+ LGI+RK LW + + L I
Sbjct: 413 ASNDLSLEDYFQHFVLENQDRMSETEL--AQKLGISRKSLWERRQRLGI 459