Pairwise Alignments

Query, 1008 a.a., formate dehydrogenase, alpha subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 950 a.a., formate dehydrogenase alpha subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  270 bits (689), Expect = 5e-76
 Identities = 198/656 (30%), Positives = 305/656 (46%), Gaps = 111/656 (16%)

Query: 3   VNRRQFLK---LSAGATLASAFGGLGISLAPSVARAELQKLQWAKQTTSVCCYCAVGCGL 59
           +NRRQFLK   L+ G   A++  G G+ +  + A+  +      +   ++C +CAVGCG+
Sbjct: 20  LNRRQFLKSAGLATGGIAAASMLGTGM-MRKAQAQEHIPHNAPTEVKRTICSHCAVGCGI 78

Query: 60  IVHTAKNGEGRAVNVEGDPDHPINEGSLCPKGASIFQLGENNARSPKPLYRGPNSGEWKE 119
               A+   G     E   DHP N+G  C KGA++ + G    R   P+      G+WK+
Sbjct: 79  Y---AEVQNGVWTGQEPAFDHPFNQGGHCAKGAALREHGHGEKRLKYPMKL--EGGKWKK 133

Query: 120 VEWDWALTEIAKRVKKTRDESFQLANAAGEKVNRTEAIASFGSAAMDNEECWAYQVILRS 179
           + W+ A+ E+  ++   R ES              ++I   GSA   NE+ + Y+ +   
Sbjct: 134 ISWEQAINEVGDKMTAIRQES------------GPDSIYFMGSAKFSNEQAYLYRKLAAL 181

Query: 180 LGLVFIEHQARIUHSPTVPALAESFGRGAMTNHWNDLANSDCVLIMGSNAAENHPISFKW 239
            G   ++H ARI HS TV  +A ++G GA TN  ND+ NS C++ +GSN +E HP++ + 
Sbjct: 182 WGTNNVDHSARICHSTTVAGVANTWGYGAQTNSLNDIRNSKCIMFVGSNPSEAHPVAMQH 241

Query: 240 VLRAQDKGATLIHVDPRFTRTSAKCDIYAPIRSGADIPFLGGLIKYILENKLYFEEYVRE 299
           +L A+++GA +I VDPRFTRT+AK D Y  IR G DIPF+ GL+ +I EN    +E++  
Sbjct: 242 ILVAKERGAKIIVVDPRFTRTAAKSDEYVHIRPGTDIPFIYGLLWHIFENGWEDKEFI-- 299

Query: 300 YTNASLIVGEKFSFKDGLFSGYDADKRKYDKSQWAFELDENGVPRRDPSLKHPRCVFNLM 359
                                   ++R Y            G+ R              +
Sbjct: 300 ------------------------NQRVY------------GMER--------------I 309

Query: 360 KKHYERYTVDKVADITGTPKDLILKVYKAYAATGKPDKAGTIMYAMGWTQHSVGVQNIRA 419
           +   ++YT ++V ++ G PK  + ++ K  A T    K GTI++ MG TQH VG  N R+
Sbjct: 310 RDEVKKYTPEEVENVAGVPKAQMYRIAKMLAET----KPGTIVWCMGGTQHHVGNANTRS 365

Query: 420 MAMIQLLLGNIGVAGGGVNALRGESNVQGSTDQGLLAHIWPAYNPAPNSKQTTLDAYNAA 479
             ++QL LGN+GV+GGG N  RG  NVQG+TD GLL    P Y    +            
Sbjct: 366 YCILQLALGNMGVSGGGTNIFRGHDNVQGATDFGLLFDNLPGYYGLTSGAWAHWSGV--- 422

Query: 480 TPQSKDPMSVNWWQNRPKYVASYLKALYPDLAPADAYDIMPRLDASKPATYYFWLNIFDK 539
                       W   PK+VA             +     P+     P + +    + DK
Sbjct: 423 ------------WDLDPKWVAGRFD-------QGEYLGQTPQTSTGIPCSRWHDGVLEDK 463

Query: 540 ---MDKGDVKGCFAWGMNPACGGANANKNRRALGKLDWLVNVNIFENETSSFWKGPGMKP 596
                K +++  F WG +         + R AL KLD +V V+              M  
Sbjct: 464 TKIAQKDNIRLAFFWGQS-VNTETRGREVREALNKLDTVVVVDPIPTMAGV------MHQ 516

Query: 597 EEIGTEVFFLPCAVSIEKEGSVANSGRWMQWRYRGPKPWGQTKPDGDIMLEMMHKI 652
            + G  V+ LP A   E  GSV+ + R +QWR +  +P  ++ PD  IM ++  K+
Sbjct: 517 RKDG--VYLLPAATQFETYGSVSATNRSIQWRSKVIEPLFESLPDHVIMYKLAKKL 570



 Score = 52.8 bits (125), Expect = 1e-10
 Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 32/190 (16%)

Query: 837  PEHYEPLECP----VSKNPFSKQ---LHNPVAFKIEGEKAAVCDPKFPFIGTTYRVTEHW 889
            P H EPL  P    V+K P  +       P  +K   +K       FP   T+ R+ E+ 
Sbjct: 770  PLHREPLYTPRRDLVAKYPTYEDRMVARLPTLYKSIQDKDFT--QGFPLTLTSGRLVEYE 827

Query: 890  QTGLMTRRCAWLVEAEPEIFAEVSKELAKLRGIKNGDRVKVSSLRGS-LEAVAIVTERIK 948
              G  +R   WL E + E+F E++   A  RGI++GD V V S  G+ +   A+VT R+ 
Sbjct: 828  GGGEESRSNPWLAELQQEMFIEMNPADAADRGIRDGDNVFVHSPEGAKITVKAMVTPRVV 887

Query: 949  PYKVMGAEIHMVGLPWHYGWM--------------VPRNGGDTANLLTPSAGDPNTGIPE 994
            P +          +P+H+  +              VP   G++AN +     D  T + E
Sbjct: 888  PGECF--------MPYHFAGIFEGENLAKNYPEGTVPYVQGESANTILTYGYDVVTQMQE 939

Query: 995  TKAFMVDIRK 1004
            TK+ +  + K
Sbjct: 940  TKSSLCQVSK 949