Pairwise Alignments

Query, 445 a.a., UDP-N-acetylmuramoylalanine/D-glutamate ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 443 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  186 bits (471), Expect = 2e-51
 Identities = 146/447 (32%), Positives = 219/447 (48%), Gaps = 42/447 (9%)

Query: 18  VVVGAGRSGMAAARLLHRMGARVRLLERNADGVPADFVRWAAEAGVEIATGDHAPTQFEG 77
           VV+G G +G++  R L R G  V L+  +    P   V  A    V + TG         
Sbjct: 12  VVLGLGATGLSVVRFLARKGI-VPLVMDSRRQPPGMDVLSAEFPDVTLVTGGFDCRYLVQ 70

Query: 78  ARAVVPSPGMAVS--KLRPLLAQGPDAPEIMAEMELAWRQL-DGEP-VLAVTGTSGKTTT 133
           A++++ SPG+AV   ++R  +  G    E++ ++EL  R++ D  P VLA+TG++GK+T 
Sbjct: 71  AQSIIISPGIAVDTPEVRAAMDMGI---EVIGDVELFAREIQDMAPCVLAITGSNGKSTV 127

Query: 134 VSLCAAMLRAQGLSVFLGGNIGTPLSEYVLSVAHGGADGQGRADVLVIEISSFQLQACTT 193
            +L   M RA   +V +GGNIG P  E +         G+G A++ V+E+SSFQL+   +
Sbjct: 128 TTLVGEMARADNKAVAVGGNIGVPALELL---------GKG-AELFVLELSSFQLETTHS 177

Query: 194 FRPRVAMLLNISENHLDYHADMAEYIDAKFRLFRCM---------------EEGDLAIFG 238
                   LNISE+H+D + D+  Y  AK RL+                  E  +   FG
Sbjct: 178 LHCIAGTCLNISEDHMDRYTDLEAYRQAKLRLYPQSKLSVYNRDDAATIPDEPRNTVSFG 237

Query: 239 QGVRDLVAARDLKPRTLFFDAAARRFPRTCLLGGHNQANIEAAWQACREFGVTPEAAEKA 298
            GV +L     +  +     +         L+G HN AN+ AA   C   G++ EA  K 
Sbjct: 238 LGVPELDDWGLMDGKIYHGASEIMNLLDVALIGSHNHANLLAAMALCEAAGISREAMVKV 297

Query: 299 VADFAPMEHRLEAVAERNGVLWVNDSKCTTVEALRVALQAFDR---PVVLMVGGKFKGGD 355
             +F  + HR E VA  N + WVNDSK T V A   AL         ++L+ GG  KG D
Sbjct: 298 AKEFTGLAHRCELVASHNSIAWVNDSKATNVGATVAALNGLAEHLGDIILIAGGDGKGAD 357

Query: 356 LASLLPLLCGRVRAVVGFGASREHFEGAWMGQGDFPMSWHPALEPAVAEAAALARPGDAV 415
              L   L G V  ++  G  R+  + A + +G   ++    +  AV +A ALA PGD V
Sbjct: 358 FEPLRGAL-GAVSHLITLG--RDGDKIAVLKEGAIKVA---TMAEAVEKAKALANPGDIV 411

Query: 416 VMAPATSSFDLFANYKERGHAFRRAVE 442
           +++PA +S D++ N+  RG  FR  VE
Sbjct: 412 LLSPACASLDMYTNFMARGDDFRANVE 438