Pairwise Alignments

Query, 445 a.a., UDP-N-acetylmuramoylalanine/D-glutamate ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 443 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella loihica PV-4

 Score =  179 bits (454), Expect = 2e-49
 Identities = 145/463 (31%), Positives = 223/463 (48%), Gaps = 70/463 (15%)

Query: 18  VVVGAGRSGMAAARLLHRMGARVRLLERNADGVPADFVRWAAEAGVEIATGDHAPTQFEG 77
           +V+G G +G++  R L + G    +++ + +  P           V + TG         
Sbjct: 8   IVLGLGATGLSVVRYLIKQGITPLVMD-SRENPPGRETLSQEFPEVLLLTGGFDCRYLVQ 66

Query: 78  ARAVVPSPGMAV--SKLRPLLAQGPDAPEIMAEMELAWRQLDGEP--VLAVTGTSGKTTT 133
           A  +V SPG+ +  +++R  +  G D   I+ ++EL  R L   P  V+ +TG++GK+T 
Sbjct: 67  ASQIVVSPGIPLDTAEVRAAVDMGID---IVGDVELFARALADRPACVIGITGSNGKSTV 123

Query: 134 VSLCAAMLRAQGLSVFLGGNIGTPLSEYVLSVAHGGADGQGRADVLVIEISSFQLQACTT 193
            +L   M    GL V +GGNIG P+ + +           G  ++ V+E+SSFQL+  ++
Sbjct: 124 TTLVGEMAAKAGLKVAVGGNIGVPVLDLL----------DGDHELFVLELSSFQLETTSS 173

Query: 194 FRPRVAMLLNISENHLDYHADMAEYIDAKFRLFRCMEEGDLAIFGQGVRDLVAARDLKPR 253
                A  LNISE+H+D ++D+  Y  AK RL+   ++  LAIF    RD +  R  +P 
Sbjct: 174 LNCISATCLNISEDHMDRYSDLESYRQAKLRLY---DQTKLAIFN---RDDLLTRPNEPM 227

Query: 254 -------------------------TLFFDAAARRFPRTCLLGGHNQANIEAAWQACREF 288
                                    T  + A A+      L+G HNQAN+  A       
Sbjct: 228 NQNSFGLSLPEGDEWGVNHGVLVHGTTEYVAGAQ----VSLVGSHNQANLLVAMALADSA 283

Query: 289 GVTPEAAEKAVADFAPMEHRLEAVAERNGVLWVNDSKCTTVEALRVALQAF---DRPVVL 345
           GV   A  +    F  + HR E V +  GV +VNDSK T V A   ALQ     +  ++L
Sbjct: 284 GVDKAAMVEVAKQFKGLAHRCELVGKHQGVSYVNDSKATNVGATIAALQGLSDHEGQIIL 343

Query: 346 MVGGKFKGGDLASLLPLLCGRVRAVVGFGAS----REHFEGAWMGQGDFPMSWHPALEPA 401
           + GG  KG D ++L   L G V  V+  G       E F+GA   +         +++ A
Sbjct: 344 IAGGDGKGADFSTLRGALLG-VGQVITLGKDGDRIAEQFDGAIRVE---------SMQEA 393

Query: 402 VAEAAALARPGDAVVMAPATSSFDLFANYKERGHAFRRAVEAL 444
           VA+AA LA+PGD V+++PA +S D++AN+  RG  FR  VEAL
Sbjct: 394 VAQAAQLAKPGDLVLLSPACASLDMYANFMARGDDFRAQVEAL 436