Pairwise Alignments

Query, 445 a.a., UDP-N-acetylmuramoylalanine/D-glutamate ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 446 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) from Sphingomonas koreensis DSMZ 15582

 Score =  185 bits (470), Expect = 2e-51
 Identities = 151/456 (33%), Positives = 216/456 (47%), Gaps = 36/456 (7%)

Query: 10  TIGKGDLVVVVGAGRSGMAAAR-LLHRMGARVRLLERNADGVPADFVRWAAEAGVEIATG 68
           T  +G    V+G  RSG+A  R LL      V   + + +   A F   A +   ++  G
Sbjct: 5   TSWRGKRYAVLGLARSGLATMRALLAAQSRTVSAWDMSEERRDAAF-ELAGKTIADLPIG 63

Query: 69  --------DHAPTQFEGARAVVPSPGMAVSKLRPLLAQGPDAP-EIMAEMEL---AWRQL 116
                   D   T   G   V  SPG+ ++   P+ A+   A   ++ ++EL   A  +L
Sbjct: 64  EAHSFLLQDPLETDLTGFAGVAVSPGVPINH-HPIAARARAAGVPLIGDIELFAQARAEL 122

Query: 117 DGEPVLAVTGTSGKTTTVSLCAAMLRAQGLSVFLGGNIGTPLSEYVLSVAHGGADGQGRA 176
               V+ +TGT+GK+TT +L   +L   G+   LGGNIG P+          G +     
Sbjct: 123 PAHKVVGITGTNGKSTTTALIHHILETAGIPARLGGNIGLPIL---------GQEPLPEG 173

Query: 177 DVLVIEISSFQLQACTTFRPRVAMLLNISENHLDYHADMAEYIDAKFRLFRCMEEGDLAI 236
            + V+E+SS+Q+    T    VA+LLNI+ +HLD +     Y  +K  LF    +G  AI
Sbjct: 174 GIYVLELSSYQIDLTQTLDCDVAVLLNITPDHLDRYDGFESYAASKAELFEMQSKGHAAI 233

Query: 237 FGQGVRDLVAARDLKPRTLFFDAAARRFPRTC--------LLGGHNQANIEAAWQACREF 288
            G G     A      R    +   R  P  C        L G HN  N  AA  AC   
Sbjct: 234 IGIGDEASQAIAKQVSRAGRAEDLTRIAPGVCMDQSRWPALQGPHNAQNALAAIAACEAL 293

Query: 289 GVTPEAAEKAVADFAPMEHRLEAVAERNGVLWVNDSKCTTVEALRVALQAFDRPVVLMVG 348
           GV     E  +  F  + HR+E VA  NGVL+VNDSK T   +   AL+AFDR +  ++G
Sbjct: 294 GVAQTMIEAGLRSFPGLPHRMERVATVNGVLFVNDSKATNPTSTAPALEAFDR-IHWILG 352

Query: 349 GKFKGGDLASLLPLLCGRVRAVVGFGASREHFEGAWMGQGDFPMSWHPALEPAVAEAAAL 408
           G  K  DL +  P     VRA    G + E F G  + + +FP+     L  AV  AAA 
Sbjct: 353 GLAKTDDLDACRPGFGHVVRAYT-IGDATELFAG--LLKDEFPVEESGTLSAAVKAAAAR 409

Query: 409 ARPGDAVVMAPATSSFDLFANYKERGHAFRRAVEAL 444
           A+PG+ V+++PA +SFD F ++++RG  FR AV AL
Sbjct: 410 AQPGETVLLSPACASFDQFRDFEDRGAQFREAVGAL 445