Pairwise Alignments

Query, 455 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 486 a.a., UDP-N-acetylmuramate--L-alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  430 bits (1106), Expect = e-125
 Identities = 225/446 (50%), Positives = 297/446 (66%), Gaps = 6/446 (1%)

Query: 5   KIKKIHMVGIGGSGMSGIAEVLLNLGYEVCGSDMSDGTVVRRLRKLGAEIYIGHGEGNLT 64
           ++K IH +GIGG+GMSGIAEVLLN GY++ GSD++   V  RL   GA I+IGH   N+ 
Sbjct: 21  RVKAIHFIGIGGAGMSGIAEVLLNEGYQISGSDLAANAVTDRLADKGATIFIGHEAHNVA 80

Query: 65  DAQVLVKSTAIGDENPEVAAARKRGIPIIPRAEMLAELMRLRTGIAIAGTHGKTTTTSLT 124
            A V+V STAI ++NPE+ AAR++ IPI+ RAEMLAELMR R GIA+AGTHGKTTTT+L 
Sbjct: 81  HASVVVVSTAINEQNPEIQAAREKRIPIVRRAEMLAELMRFRHGIAVAGTHGKTTTTALV 140

Query: 125 AAIFDEAGTDPTVIIGGRLNAYGANARLGDGAYLIAEADESDGSFLCLFPIVTVVTNVDM 184
             I+ EAG DPT + GG + + G NARLG    LIAEADESD SFL L P+VT+VTN++ 
Sbjct: 141 TQIYSEAGLDPTFVNGGLVKSAGTNARLGSSRILIAEADESDASFLHLQPMVTIVTNIEA 200

Query: 185 DHMDHYPSQ-QAIDDAFVDFMNKVPFYGMNVVCGDDPGVRRLLPRVKRPVVTYGFGEGNA 243
           DHMD Y    + +   F+DF++ +PFYG  ++C DDP +R L+PRV R V+TYGF E   
Sbjct: 201 DHMDTYGGDFENLKQTFIDFLHNLPFYGQAILCIDDPVIRELIPRVSRQVITYGFSEDAD 260

Query: 244 IRAE-VLACADSSLFNVIVNGDDIGQVRLAQPGRHNILNALAAIGVALECDIAPEKIVAG 302
           +R E          F V+  G     + L  PGRHN LNA AAI VA E DI  E I+  
Sbjct: 261 VRIENYRQNGQQGQFTVVRKGKANLDITLNIPGRHNALNAAAAIAVATEDDIRDEAILRA 320

Query: 303 LAKFGGVGRRFERKGE---RDGV-LVVDDYGHHPAEIAATLATARQCFPHRRLVVVFQPH 358
           +A   G GRRF+  GE    +GV ++VDDYGHHP E+  T+  AR  +  +RLV++FQPH
Sbjct: 321 MANTQGTGRRFDHLGEFETGNGVAMLVDDYGHHPTEVDVTIKAARNGWAEKRLVMIFQPH 380

Query: 359 RFSRTQALFGEFCKVFDGVDKLLLTEIYPASEKPIPGVSGQSLAQGIRQVSKTDVTYHQD 418
           R++RT+ L+ +F  V + VD L++ ++Y A EKPI G  G+SL + IR   K D  +  D
Sbjct: 381 RYTRTRDLYDDFANVLEQVDVLIMLDVYAAGEKPIAGADGRSLCRTIRSRGKIDPIFVPD 440

Query: 419 FDSVLAALPEVLQPGDLLLTLGAGNV 444
             ++ + L  +LQ GDL+LT GAG+V
Sbjct: 441 SQTLPSVLANILQDGDLVLTQGAGDV 466